| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6562 |
|---|
| Symbol | |
|---|
| ID | 8337926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7556272 |
|---|
| End bp | 7557162 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644959656 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003117249 |
|---|
| Protein GI | 256395685 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGC GCGGGCGCGC GCTCGCCGAG GCCGACCAGG CCACCAAGCG CTACGGCTCG
TTCACGGCCG TCGAGGCGGT CAGCATGCGT GTCGATCCCG GCGAGATCGT CGGCCTGCTC
GGGTCCAACG GCGCGGGCAA GACGACGTTG ATCCGCATGC TCCTGGGTCT GACCCGCGTC
AGCGACGGCA CGGTCGCCGT CTTCGGCCAG GCGCCGGACC GCACCACGCG CCAGCGCCTG
GGCTACGTGC CGCAGGGCCT GGGGCTGTGG GAGACGTTGA CGGTCCAGGA GAACATCGCC
TTCGCCGCTG CCGCGTTCGG CACCGACGCC ACGGCCACGA CCCTGACCCC CGGCCTGCTG
AAAGCCCGCG ACCAGCAGGT CTCCGCGATC GGCCTCGGCC TGCAACGCCA GCTCGCCTTC
ACCATCGCCC TGGCCCACCG GCCGAAGCTG CTGGTCCTGG ACGAACCCAC CTCCGGCCTG
GACCCGCTGT CCCGAGCCCG GCTGTGGGAC ACGATCCACG ACCAGGCCGA CGACGGCGCC
GGCATCCTCG TCACCACCCA CTACATGCAA GAGGCGCAGC AGTGCGACCG CCTGATCCTC
ATGTCCCACG GCCAATCAGT GGCCGAAGGC ACCGAGGCCG CCATCATCGG CGACACCACC
GCCTGCGAAG TCGACACCTC CGGCGACCAA TGGGCCGCCG CCTTCGCCGC CCTGGATGCC
GCCGCCCTGC CCGTCACCCT GGCCGGCCGC ACCGTCCGCC TGGCCGACAC GCCCCAGGAC
ACCATCCACG ACACCCTGGC GCAGGCGGGC ATCGACGCCA GGATCCGCGA AGTGCCCGCC
ACACTGGAGG AGAAGATGAC CGTCATCGAA CGGGTCGTGA CGGCCGGCTG A
|
|---|
| Protein sequence | MAGRGRALAE ADQATKRYGS FTAVEAVSMR VDPGEIVGLL GSNGAGKTTL IRMLLGLTRV
SDGTVAVFGQ APDRTTRQRL GYVPQGLGLW ETLTVQENIA FAAAAFGTDA TATTLTPGLL
KARDQQVSAI GLGLQRQLAF TIALAHRPKL LVLDEPTSGL DPLSRARLWD TIHDQADDGA
GILVTTHYMQ EAQQCDRLIL MSHGQSVAEG TEAAIIGDTT ACEVDTSGDQ WAAAFAALDA
AALPVTLAGR TVRLADTPQD TIHDTLAQAG IDARIREVPA TLEEKMTVIE RVVTAG
|
|---|
| |