Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6560 |
Symbol | |
ID | 8337924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7554838 |
End bp | 7555449 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959654 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117247 |
Protein GI | 256395683 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAA CAGTGGGCAG CAACGCGACG GACACCAGGC GCCGCATCCT GGACTCGGCC ACCGAGGTCT TCGCCGAGCA CGGATACTCC GGTGCCTCGA TGCGCGACAT CGCCGAGCGG CTGGGCATCA CCAAAGCCGG GCTCTACTAC CACTTCGCGT CCAAGGAAGA GCTGCTCGAC GGCCTGATCC GGCCGGTGCT GCAGAAGATG AGGGACTTCG CCGACGCGGC GGAGGCCGGC CACTACCCGA CCCGCCAGTT CCTGCGCGAA TTCCTCGACC TGATCATCGA CGGCGTCCCG GCCCTGCAGC CGCTGTTCAT GGACCCCGGC GCCCGAGCCG CGATCAAGGA ACGCTACGAC CCGATGGATC TCGGACGCCG CATCGAAGCC GCGCTCACAG ACGGCGCCGA TCCCGATCGT GCGCTGCGCG TGCAGTTCGT CCTGGGGGGC ATCCGCTCAC TGGTGATCGG GCACAAGTTC AGGGCACACG GCGAGGCGTA CGGGCCCCAC GGACATCCCG CGGCTGCCGG CCCGGCGACA CTCACCGACG CCGAGCGCGA AGTCATCGTC GACGCGGCGT TGGCCGGACT CGGGGAAGGC GGCTTGGCTT AG
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Protein sequence | MARTVGSNAT DTRRRILDSA TEVFAEHGYS GASMRDIAER LGITKAGLYY HFASKEELLD GLIRPVLQKM RDFADAAEAG HYPTRQFLRE FLDLIIDGVP ALQPLFMDPG ARAAIKERYD PMDLGRRIEA ALTDGADPDR ALRVQFVLGG IRSLVIGHKF RAHGEAYGPH GHPAAAGPAT LTDAEREVIV DAALAGLGEG GLA
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