Gene Caci_6549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6549 
Symbol 
ID8337913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7542288 
End bp7542710 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content68% 
IMG OID644959645 
Productprotein of unknown function DUF1469 
Protein accessionYP_003117238 
Protein GI256395674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0142295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.044822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG AGAGAATCAC GCCGTCGGTG CACACCTCGA CCGCGGAACT GGTGAACGAC 
GCCACAGCGC AGATGTCGCG GCTGGTCCAC GACGAGCTCG CTCTGGCCAA GCTGGAGATG
CAGATCAAGG CCAAGCGTCT GGGTACGGCC GGCGCCCTGC TCGCCTCGGC GCTCCTGCTG
GCCCGGATCG GACTGGTCCT GGCGTGGACG CTGGTCGTGG TGGCGCTGGC GAATGTCTGG
CCGTTGTGGC TGGCGGTCGC GGTTCCCATG GCCGGTGCGT TCCTCGTGGC CGGCGTGCTG
GCCCTGGTCG GCAAGAAGCG CTTGGCGAAG GGCGTCCCGC CGGTGCCCAC AGAAGCCGCC
GAATCCGTTC GCGAGGATCT GCGCCGGGCC CAGGATGCTT TCCACGAAGG GCGTCAATCA
TGA
 
Protein sequence
MTAERITPSV HTSTAELVND ATAQMSRLVH DELALAKLEM QIKAKRLGTA GALLASALLL 
ARIGLVLAWT LVVVALANVW PLWLAVAVPM AGAFLVAGVL ALVGKKRLAK GVPPVPTEAA
ESVREDLRRA QDAFHEGRQS