Gene Caci_6541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6541 
Symbol 
ID8337905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7537995 
End bp7538861 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID644959637 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003117230 
Protein GI256395666 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.403554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0826923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG ATTTCGAGAC CGAGGTGGTG CAAACCGGCC AGGCCTCTAT CTTCGTCCGG 
TACGGGGGCG AAGGGCCGCC GGTGTTGCTG CTGCATGGGC ATCCGCGTAC TTCGGCGACC
TGGTACGAGG TCGCGCCGGC GATGGTGCGG CGCGGCTACC GGGTCGTCTG CGCCGATCTT
CGAGGATATG GGCGCTCGCG CGGTCCTGCA CCAACCGCTG ACCACACTGC CCACTGCAAG
CGGGCAGTCG CCGACGATCT GGTCGCGGTC ATGCGGCACC TGGGCTTGGA CCACGAGGGC
TTCGCTCTGG CCGGTCACGA CCGGGGCGGT GCGGTGGCAC TCCGGTTGGT CTTGGACTAC
CCGGAGCTGG TGCGCCGGGT GGCTTTCCTG GACTGTCTGC CGATCAGTGA GCATCTCAAC
CGCATTTCCG CGCGGTTTGC GACGGCGTGG TGGCACTGGT TCTTCTTCGC TCAGCCGGAC
ATTCCCGAGC GGGTCATCAC AGCCGATCCC GATCGCTGGT ATCAGGGAGA TCCGGCTCAG
ATGGGAGTGG AGAACCATCG GGAATGGCGC GAGGCAGTTC GCGATCCCGA TGTCGTGCGG
GCCATGTTGG AGGACTACCG CGCCGGCCTG ACCGTTGATC GGCGCGACGA AGAAGCCGAT
CGGGCGGCCG GAAACCGGGT CCGCTGCCCG GCGCTGGTGC TCTGGTCGCT GCGCGACGAT
CTGGAGGATC TGTATGGTGA CCCGCTGCGC ATCTGGCGCG ACTGGGCCGA CGATGTCCGT
GGGCACGGTA TCGACAGTGG ACACCACATG GCCGAACAAG CTTCGGATGA GCTGACCGCA
GCGCTCGACT CGTTCATGAG GGAGTAG
 
Protein sequence
MFEDFETEVV QTGQASIFVR YGGEGPPVLL LHGHPRTSAT WYEVAPAMVR RGYRVVCADL 
RGYGRSRGPA PTADHTAHCK RAVADDLVAV MRHLGLDHEG FALAGHDRGG AVALRLVLDY
PELVRRVAFL DCLPISEHLN RISARFATAW WHWFFFAQPD IPERVITADP DRWYQGDPAQ
MGVENHREWR EAVRDPDVVR AMLEDYRAGL TVDRRDEEAD RAAGNRVRCP ALVLWSLRDD
LEDLYGDPLR IWRDWADDVR GHGIDSGHHM AEQASDELTA ALDSFMRE