| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6477 |
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| Symbol | |
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| ID | 8337841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7467373 |
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| End bp | 7469184 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959575 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_003117168 |
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| Protein GI | 256395604 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.217182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG ATGCGGGGGA TGTTCGGGCG ATGGCCGTCG CCGTGTTGGG GATCGGTGGT
CTGTGGGTCC ATGAGGACCG GACGGCGGCG GGCTGGGCAT CGCTCCAGAC GCGTCTGCGA
GGTGCTTTGG CGCAGGTCGA TCCGCAGTCC GTACTCGGCG TCCGTCTCAG GGCACGGCTG
GCCGCCGAGT CCGACTACCG CCACGGCGGG CACGCCGAGA TCCTCGCGGT GCTCGACGAG
GCGCGGAAGC TGCTGGATCC CGAGGCGCGC GCCGAGGTGC TGAACCTGGC CCACCACTGT
CTGCTGGGTC CCGGCCAGGG CCCGCTGCGG CGGGAACTGG CCGACGAGCT CGTGCGGGAG
GCCGTCGCCT CCGGGCGGCG CAGCCATCTG CTGATGGGCC TGCTGTGGCA GACGGTCGAT
CTGTTCCTCG ACGGCGACCC GCACGCTCGG CGGCGGCTCG GCGAGCTGCG CGACCACACG
GCCCGTGACG ACCATCTCGC GGTCGGGTTC GTGGTGAGCG CGATCGACGT GATGCTCGCC
CTTCGCGAAG GGGACTTCGA CCGGGCCGAA AAGCTGGCGG CCCTCTGCCA CGAGCGCGGG
ACAGCGGCTG GCGACGTCGA CGCCACCGCG TGGTACTGCG CGCAGCTGGT CGCGATCCGG
TGGTACCAGG GCCGGCTGCC CGAGCTGCTT CCGCTGATGG AGGATCTGGT CCACTCCCCG
TCGCTGAGCG TCGTGGACAA CGCGTGTTCG GCGGCGCTGG CCGTGGCCGC GGCGATGACC
GGAGACCGTC GGAGGGCGGT CGGCCTGCTG TCCGCGCTCC GTGGCTGCGA TCGCGAGGAC
CTGCCGCGGT CCAGCAGCTG GTTGGTGACG ATGACCGGCA TCGTGGAGGC CGCGCACCTG
CTGGGGGACG CCGAGACCGC GTCGCGGGCC TATGAGATGC TGGCGCCGTT CGGCAACCTG
CCAGCGATAG TCAGCCTCGG GGTGGCCTGT TTCGGATCGG TCCACCAGGC CTTGGGCCTC
GCGTCCCTGA CAGCCGGCGA CGTCGACAGA GCTGTGGACC ACTTGCGCGA AGCGGTTCAG
CAGAACCTCG GGTTGGAGCA CTGGCCCGCC GCTGCGATTT CCCGCGCACG CTATGCGCAG
GCACTCGCTC TCCGCGCACA GCCGCAGGAT GCCCCTGTCG TTCAGCTCGA ACTCGCCGCC
GCCGACCAGG AGGCCACCGC CCTCGGCGTC GCATTGCCGG GCGGCGTCGC GAGCAAACCA
GGACCCTTGC AGGCCGTGTG CGTGCGAGCG GGCCGCTCTT GGCACCTCGC CTTGGGGCCG
CGTACGGCCG TCGTCAAGGA CAGTGTCGGG ATGCTGCACC TGGCGGTGCT GATCGCCAAT
CCCGGGCAGG AAATCCGCGC TCTCGACCTG GTCGCGGGGG TGTCCGCGCT GAGCGGCACA
GCGGGTGCCT CGGTGCGTGA CGAAGCGGTG AACCTGTCAG CGCAGTCCGT TCTCGATCCT
ATGGCGGTCA AGCAGTACCG CCGACGGCTC TTGGAGCTGT CGGGGGAGAT GGACGAGCTG
GAACGCCGGG GCGACGACGA GTCCGTGTCG GCCTCGCGGG TCGAGCGCGA CTGGCTGGTC
GCCGAGCTGG CCGACGCGAC AGGGATCGGC AGCCGTCCGC GACGGTTCGT CCAGAGCGGC
GAGCGGGCCC GGGTCGCGGC GACCAAAGCG ATCCGCCGAG CCGTCGCCCA TGTCACCGAA
GTCGACGCTG TGATCGGCGA ACACCTGGCG ACTGCCGTGC GGACCGGCAC GTCCTGCTCC
TACCGGCTTT GA
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| Protein sequence | MAADAGDVRA MAVAVLGIGG LWVHEDRTAA GWASLQTRLR GALAQVDPQS VLGVRLRARL
AAESDYRHGG HAEILAVLDE ARKLLDPEAR AEVLNLAHHC LLGPGQGPLR RELADELVRE
AVASGRRSHL LMGLLWQTVD LFLDGDPHAR RRLGELRDHT ARDDHLAVGF VVSAIDVMLA
LREGDFDRAE KLAALCHERG TAAGDVDATA WYCAQLVAIR WYQGRLPELL PLMEDLVHSP
SLSVVDNACS AALAVAAAMT GDRRRAVGLL SALRGCDRED LPRSSSWLVT MTGIVEAAHL
LGDAETASRA YEMLAPFGNL PAIVSLGVAC FGSVHQALGL ASLTAGDVDR AVDHLREAVQ
QNLGLEHWPA AAISRARYAQ ALALRAQPQD APVVQLELAA ADQEATALGV ALPGGVASKP
GPLQAVCVRA GRSWHLALGP RTAVVKDSVG MLHLAVLIAN PGQEIRALDL VAGVSALSGT
AGASVRDEAV NLSAQSVLDP MAVKQYRRRL LELSGEMDEL ERRGDDESVS ASRVERDWLV
AELADATGIG SRPRRFVQSG ERARVAATKA IRRAVAHVTE VDAVIGEHLA TAVRTGTSCS
YRL
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