Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6475 |
Symbol | |
ID | 8337839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7466232 |
End bp | 7466792 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644959573 |
Product | Ricin B lectin |
Protein accession | YP_003117166 |
Protein GI | 256395602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.956951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC TCCGCAATGC CATATTCGCC GCCGGCTTCG CGGCCGTCGC GTCCGGTGTT TTTGGGGCGG CGACTGTCGC ACACGCTTCG ACCAGCGGAC CGCTGACGAT CTCCAACTTC GGGACCAACC AATGCCTCCA ACCGGTCGGG GAATCGACCG CAGCGGGGGC AGCGATCGTC CAGGAGCCGT GCGACGGCAG CCCCGCCCAG ACCTGGTTCG AGTATCCCGT CGGCGGGACC ATCGGCCACT ACAAGAACAG CTACAGCGGG CTGTGCCTCG ACGCCAGAGG GAGCGCTGTC AACGGCACCC CGGTTCAGCA GTGGGTGTGC AACGGCATCA GCAACGAGAA CTGGGAATAC CCAGACGTCC CGTCAGACGA CGTTCCGCCG CTGATCTCCC GGGTTTCCGG GACCAGCACC CACTGCCTCG ACGTTCCCGG CGCGCAGAAC ACCCCCGGGC TCGCCATGCA GATCTACCGC TGCAACGGCT CCGAGGCGCA GCTGTGGTGG CAGTGGCCAC CTACCCCGCC AAGCATCAAC CTTGAGAAGG GACTGACATG A
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Protein sequence | MKRLRNAIFA AGFAAVASGV FGAATVAHAS TSGPLTISNF GTNQCLQPVG ESTAAGAAIV QEPCDGSPAQ TWFEYPVGGT IGHYKNSYSG LCLDARGSAV NGTPVQQWVC NGISNENWEY PDVPSDDVPP LISRVSGTST HCLDVPGAQN TPGLAMQIYR CNGSEAQLWW QWPPTPPSIN LEKGLT
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