Gene Caci_6475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6475 
Symbol 
ID8337839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7466232 
End bp7466792 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID644959573 
ProductRicin B lectin 
Protein accessionYP_003117166 
Protein GI256395602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.956951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TCCGCAATGC CATATTCGCC GCCGGCTTCG CGGCCGTCGC GTCCGGTGTT 
TTTGGGGCGG CGACTGTCGC ACACGCTTCG ACCAGCGGAC CGCTGACGAT CTCCAACTTC
GGGACCAACC AATGCCTCCA ACCGGTCGGG GAATCGACCG CAGCGGGGGC AGCGATCGTC
CAGGAGCCGT GCGACGGCAG CCCCGCCCAG ACCTGGTTCG AGTATCCCGT CGGCGGGACC
ATCGGCCACT ACAAGAACAG CTACAGCGGG CTGTGCCTCG ACGCCAGAGG GAGCGCTGTC
AACGGCACCC CGGTTCAGCA GTGGGTGTGC AACGGCATCA GCAACGAGAA CTGGGAATAC
CCAGACGTCC CGTCAGACGA CGTTCCGCCG CTGATCTCCC GGGTTTCCGG GACCAGCACC
CACTGCCTCG ACGTTCCCGG CGCGCAGAAC ACCCCCGGGC TCGCCATGCA GATCTACCGC
TGCAACGGCT CCGAGGCGCA GCTGTGGTGG CAGTGGCCAC CTACCCCGCC AAGCATCAAC
CTTGAGAAGG GACTGACATG A
 
Protein sequence
MKRLRNAIFA AGFAAVASGV FGAATVAHAS TSGPLTISNF GTNQCLQPVG ESTAAGAAIV 
QEPCDGSPAQ TWFEYPVGGT IGHYKNSYSG LCLDARGSAV NGTPVQQWVC NGISNENWEY
PDVPSDDVPP LISRVSGTST HCLDVPGAQN TPGLAMQIYR CNGSEAQLWW QWPPTPPSIN
LEKGLT