| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6468 |
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| Symbol | |
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| ID | 8337832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7460547 |
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| End bp | 7462151 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644959567 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003117160 |
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| Protein GI | 256395596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.330754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA GTGATGTCGG CGGCGAGCCA GCAGCCGGAG CGGGCCGGAA CGGCCAGAGC
GGCGTGCTCT TCGCCATGTG CCTGTCGCTG GTACTGGTGG TCGCATCGGT CTCGGCGTTG
AACCTGGCCC TGCCGAATCT CGCCGTGGAG CTCGGAGCCA CCAATTCCGC ACTGACCTGG
ATAGCGGACG GATACACCGT GGCATTGGCC GCGCTCGTCC TGCCGCTGGG CGCCCTCGGC
GACCGAATAG GACGTCGCAA GGTGTTGATC GCCGGAAACC TCGTCTTCGG CACGGCGGCG
GTGTTCGCGG CGTACTCTCC CACGACCTCG GATCTGATCG TGAGCCGCGT GGTGATGGGC
ATAGGAGCGG CGATGATCAT GCCGGGAACG TTGTCGACGA TCACTGCGGT GTTCCCCCCG
GAGAAAAAGG ACCGCGGGGT GGCGATCTGG TCGGGGTTCG CGGCAGCCGG CGCGATCATC
GGCATGCTCG TCGCCGGCGG CCTGCTCGAG CGGTTCAGTT GGACGTCGAT CTTCTGGGCC
AGTTCTGCGA CCGCCGTGGT GTGTGCTGTC GCGGCATGGG CGCTGGCGCC GGAGACACGA
AGTTCTGAGC GGCAGCGGTT CGACTACGGC GGGTCGGTCA CCACGGCGGT GGCTATCGGG
GCACTGGTCT ACGGAATCGT TGAGGGCAAC GAGAGTGGCT GGACCCGGCC GGAAGTCGTG
GCCGCGTTCG CGGTGGCGGT TCTCGGCCTT GCCGCCTACG TGCCCATGGG ATTGCGTACG
CGTCATCCGC TTCTCGATCC ACGTCTGTTC AAGCTCCGCG GCTTCCGGGC GGGGACTCTG
GCGATCCTGA CACAGTTCAT GGCGGTCTTC GGGTTCTTCT TCGTGGGTCT GCAGTTCCTT
CAGCTGATCT TGAGCTACAG CCCGCTGAAG AGCGCCATCG CTCTGGTACC AGTGGCGGCG
GTGGTCTTGC CGACATCCGT GCTCACGCCA CGCCTCGCGG AGCGGCTGGG CGTCAGGACC
GTCATGCCTG CCGGACTGCT GTGCCTGGCA GGGGGAATGT TCTGGCTCAC CATGCTGCAT
GTCGACAGCG GCTACCTAGT GTTTCTGGGC GCACTGGTGC TGGCAGGTGT CGGCATCGGC
TTGACCAGTT CCACCGGAAC GAGCGCGATT GTGGAATCCC TCGGACCCGA CAGCCAGGGT
GTGGCTTCGG CGATGAACGA CACCACTCGC GAAGTCGGTT CGGCCGTGGG GATCGCGCTG
ATGGGCTCGG TGTTCTCCAG CCATTACCGG TCCGCGCTCC CCGCTGACGT GAGCCGACTA
CCGGCTCAGG CGGCTGCTGC GGTACACCAC TCGGCTGCGG CCGGACTGGA AGCCGCCTCA
CGCCTGGGGG TCCACGGAGC ACCGCTGGCG GCAGCGGTGC GCGGCGCGTT CATGTCCGGT
TTCACCACCG CGATGGGCGT CATCGCCGCG ATCTTGGCAG CGGCCGCTCT CGTGTGCGCC
TTCACCGCGC CGCGTCGCAG CACAAGCGAT GCTGCGCCGC TTGGGGAACA GAGCGGCGAG
CCATCCGCAG ACGCTATAGA GAGTTCCTTC GCGCCCAAGC GTTGA
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| Protein sequence | MEISDVGGEP AAGAGRNGQS GVLFAMCLSL VLVVASVSAL NLALPNLAVE LGATNSALTW
IADGYTVALA ALVLPLGALG DRIGRRKVLI AGNLVFGTAA VFAAYSPTTS DLIVSRVVMG
IGAAMIMPGT LSTITAVFPP EKKDRGVAIW SGFAAAGAII GMLVAGGLLE RFSWTSIFWA
SSATAVVCAV AAWALAPETR SSERQRFDYG GSVTTAVAIG ALVYGIVEGN ESGWTRPEVV
AAFAVAVLGL AAYVPMGLRT RHPLLDPRLF KLRGFRAGTL AILTQFMAVF GFFFVGLQFL
QLILSYSPLK SAIALVPVAA VVLPTSVLTP RLAERLGVRT VMPAGLLCLA GGMFWLTMLH
VDSGYLVFLG ALVLAGVGIG LTSSTGTSAI VESLGPDSQG VASAMNDTTR EVGSAVGIAL
MGSVFSSHYR SALPADVSRL PAQAAAAVHH SAAAGLEAAS RLGVHGAPLA AAVRGAFMSG
FTTAMGVIAA ILAAAALVCA FTAPRRSTSD AAPLGEQSGE PSADAIESSF APKR
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