Gene Caci_6454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6454 
Symbol 
ID8337818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7446775 
End bp7447176 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID644959553 
Productcyclic nucleotide-binding protein 
Protein accessionYP_003117146 
Protein GI256395582 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0782544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0803587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCCA TGACCAGCAA TCCAGTGAAC CTCACAGCCG CCCTCGCCTC GTTCGACGAC 
GTCTACAGCC CAAGGATCGT CGCCCACATG AACGACTACG ACGTCCGGAT CGCGCACACC
AAAGGCGAGC ACGTCTGGCA CGTACACGAG AACACCGACG AGTTCTTCCT CGTCCTCGAG
GGCCAGTTCG ACGTCTCACT CCGCGCAGCC GACGGGACAG AGACAACTGT CGTCCTCCAC
AAGGGCGACA CCTTCGTCGT GCCCCGCGGC ACTGAGCACA AGCCGTCCTC ACCCGGCGGC
GCCATCTTGA TGTTCGAACC CACCGGAACC TCGACCACCG GAGACCGGCA CGAAGGCGCC
ATCCCCCAGC ACGTCGACAG CACAACCGGC CACGCGCTCT AA
 
Protein sequence
MRAMTSNPVN LTAALASFDD VYSPRIVAHM NDYDVRIAHT KGEHVWHVHE NTDEFFLVLE 
GQFDVSLRAA DGTETTVVLH KGDTFVVPRG TEHKPSSPGG AILMFEPTGT STTGDRHEGA
IPQHVDSTTG HAL