Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6450 |
Symbol | |
ID | 8337814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7440956 |
End bp | 7441681 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959550 |
Product | isochorismatase hydrolase |
Protein accession | YP_003117143 |
Protein GI | 256395579 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0709723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0611102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG CTCAGGCGGC GCCCCAGACG GCGCCTCGGA CCTATGGCAC CGTCGCGGCC GAACCGTACG CGTGGCCCTA CGACGGTGTC CTGAACCCGG CGGCCACCGC GCTCGTCTGC ATCGACTGGC AGACGGACTT CTGCGGCCCC GGCGGCTACG TCGACACCAT GGGCTACGAC CTCGCCCTGA CCAGAGCCCC GCTCATCCCG ACCGCGCGCG TCCTGGCCGC GGCTCGCGCC CTCGGCTTCA CCGTGATCCA CACGCGGGAG GGCCACCGCG CCGACCTCGC CGACTGCCCG CCCAACAAGC TATGGCGCTC GCGGCAGATC GGCGCGGGCA TCGGCGATTC AGGGCCCTGC GGCCGCATCC TGGTGCGGGG CGAGCCCGGC TGGCAGATCG TCCCGGAGGC CGCGCCGCTG GAAGGCGAGC TGATCGTCGA CAAGCCCGGA AAGGGCGCCT TCTACGCCAC CGACCTCGAC CTGCTGCTGC GCACACGCGG GATCACCCAC ATCGTCCTGA CCGGCATCAC GACGGACGTC TGCGTTCACA CGACGATGCG CGAGGCCAAC GACCGAGGCT ATGAGTGCCT GCTCCTGACC GACTGCACCG GAGCCACCGA TCCGGCCAAC CACGAGGCCG CGGTGCGCAT GGTGACGATG CAGGGCGGCG TGTTCGGAGC CGTCGCGTCC TCGGAGGCGC TCCTGAAGAC GCTCGACATG GGCTGA
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Protein sequence | MTEAQAAPQT APRTYGTVAA EPYAWPYDGV LNPAATALVC IDWQTDFCGP GGYVDTMGYD LALTRAPLIP TARVLAAARA LGFTVIHTRE GHRADLADCP PNKLWRSRQI GAGIGDSGPC GRILVRGEPG WQIVPEAAPL EGELIVDKPG KGAFYATDLD LLLRTRGITH IVLTGITTDV CVHTTMREAN DRGYECLLLT DCTGATDPAN HEAAVRMVTM QGGVFGAVAS SEALLKTLDM G
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