Gene Caci_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6450 
Symbol 
ID8337814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7440956 
End bp7441681 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID644959550 
Productisochorismatase hydrolase 
Protein accessionYP_003117143 
Protein GI256395579 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0709723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0611102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG CTCAGGCGGC GCCCCAGACG GCGCCTCGGA CCTATGGCAC CGTCGCGGCC 
GAACCGTACG CGTGGCCCTA CGACGGTGTC CTGAACCCGG CGGCCACCGC GCTCGTCTGC
ATCGACTGGC AGACGGACTT CTGCGGCCCC GGCGGCTACG TCGACACCAT GGGCTACGAC
CTCGCCCTGA CCAGAGCCCC GCTCATCCCG ACCGCGCGCG TCCTGGCCGC GGCTCGCGCC
CTCGGCTTCA CCGTGATCCA CACGCGGGAG GGCCACCGCG CCGACCTCGC CGACTGCCCG
CCCAACAAGC TATGGCGCTC GCGGCAGATC GGCGCGGGCA TCGGCGATTC AGGGCCCTGC
GGCCGCATCC TGGTGCGGGG CGAGCCCGGC TGGCAGATCG TCCCGGAGGC CGCGCCGCTG
GAAGGCGAGC TGATCGTCGA CAAGCCCGGA AAGGGCGCCT TCTACGCCAC CGACCTCGAC
CTGCTGCTGC GCACACGCGG GATCACCCAC ATCGTCCTGA CCGGCATCAC GACGGACGTC
TGCGTTCACA CGACGATGCG CGAGGCCAAC GACCGAGGCT ATGAGTGCCT GCTCCTGACC
GACTGCACCG GAGCCACCGA TCCGGCCAAC CACGAGGCCG CGGTGCGCAT GGTGACGATG
CAGGGCGGCG TGTTCGGAGC CGTCGCGTCC TCGGAGGCGC TCCTGAAGAC GCTCGACATG
GGCTGA
 
Protein sequence
MTEAQAAPQT APRTYGTVAA EPYAWPYDGV LNPAATALVC IDWQTDFCGP GGYVDTMGYD 
LALTRAPLIP TARVLAAARA LGFTVIHTRE GHRADLADCP PNKLWRSRQI GAGIGDSGPC
GRILVRGEPG WQIVPEAAPL EGELIVDKPG KGAFYATDLD LLLRTRGITH IVLTGITTDV
CVHTTMREAN DRGYECLLLT DCTGATDPAN HEAAVRMVTM QGGVFGAVAS SEALLKTLDM
G