Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6446 |
Symbol | |
ID | 8337810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7436902 |
End bp | 7437612 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959546 |
Product | isochorismatase hydrolase |
Protein accession | YP_003117139 |
Protein GI | 256395575 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.443341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0975575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC GGACCGTCTC GGTTCCGGCC AGCCCGGCGC CGTTCGCGCT CGACCCCGGG TCGGCCGCGC TCATCCTCAT CGACATGCAG CGTGACTTCC TCGAGCCCGG CGGGTTCGGG GAGTCGCTCG GCAACGACGT CTCTCTGCTG CGCAAGACCA TCGCTCCGCT GCAAGCTGTG CTCGCCGCCG CCCGTGCGTC CGGTATGCCG GTGATCCATA CGCGGGAGGG GCATCTGCCC GATCTGTCCG ACTGCCCGCC GAGCAAGCTC AACCGCGGCG CGCCGTCGAT GCGGATCGGT GATCAGGGGC CGAAGGGGCG CATTCTCATC CGTGGCGAGT ATGGCCACGA CATCGTTGAC GAGTTGGCTC CCGCACCCGG TGAGCCAGTC GTCGACAAGC CCGGCAAGGG GGCGTTCTAC GCGACCGCGT TCGGGGAGAT CCTTGGCGGG CTCGGGGTCA CCCAGCTGAT CGTCACCGGC GTGACCACCG AGGTGTGCGT CCATACGACG GTCCGTGAGG CGAACGATCG CGGCTTCGAG TGCCTGGTGC TCTCCGACTG CGTCGGCTCG TATTTCGCCG ACTTCCAGGA GGCCGCGCTG GCCATGATCG CGGCCCAGGG CGGCATCTTC GGGTGGACGG CGACTTCCGC CGATTATCTG GCCGCCCTCG AATCCGCGGC CGGCGCGGAC GCCATCACGA CAGCTTCCTG A
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Protein sequence | MTARTVSVPA SPAPFALDPG SAALILIDMQ RDFLEPGGFG ESLGNDVSLL RKTIAPLQAV LAAARASGMP VIHTREGHLP DLSDCPPSKL NRGAPSMRIG DQGPKGRILI RGEYGHDIVD ELAPAPGEPV VDKPGKGAFY ATAFGEILGG LGVTQLIVTG VTTEVCVHTT VREANDRGFE CLVLSDCVGS YFADFQEAAL AMIAAQGGIF GWTATSADYL AALESAAGAD AITTAS
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