Gene Caci_6438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6438 
Symbol 
ID8337802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7429860 
End bp7431581 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content65% 
IMG OID644959538 
Productpermease for cytosine/purines uracil thiamine allantoin 
Protein accessionYP_003117131 
Protein GI256395567 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1457] Purine-cytosine permease and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.54597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA CCGACAGCTC GGCCAGAACA GGGCAGGCCT CGACCGGCAC CACCGCGACG 
ACATCGACCG GTGCCAAGCG TGCCTATCAC CGGTGGGCGA AGAACGACAC GCTCGAGGAC
TACTCGCTGC GCTACGCACC CAAGTCCTTC CGGCGCTGGA GCCCCTACGT CGTCGCCACG
ACCGCGCTCG GCGGCATCGC CTACCTCGCC GATTTCGCCA TCGGCGGCTC GATCGCCATC
TCCTATGGAT TCAGCAGCGC CGCCGTCGCG ATTCTGATCG CCGCGGTCGT CATCTTCGCC
ACCGGCATCC CGATCGCCTA CTACTCGGCG AAGTACTCCG TGGACATGGA CCTGCTGACC
CGCGGCGCGG GATTCGGCTA CCTCGGCTCG ACGCTGACCT CGATCATCTA CGCCAGCTTC
ACCTTCATCT TCTTCGCCCT CGAAGGCTCG ATCATGGCGC AGGCCTTCCA ACTCGGCCTG
CACATACCCC TGGCGGTCAG CTATCTGATC GCCTCGCTGC TCGTCATCCC CCTGGTGATC
TACGGCATGA CCGCGCTGTC GAAGATGCAG GTGTGGACCC AGCCGATCTG GCTGATCATG
ATGGTCGCGC CGTTCCTCGC CATCGCGGTC AAGGATCCCG GCGAGTTCGC CCGGTTCACG
CACTTCGGCG GCGACTCGCC GACCGGCGCC GGGTTCAGCT TTCTCAGCGC CGGGGCGGGC
GCCGGCGTAG CGCTCTCGCT CATCGCGCAG ATCGGCGAGC AGGTCGACTA CCTGCGCTTC
ATGCCGGACA AGACGGAGGA GAACAAGAAG CAGTGGTGGG GCGCGGTTCT CTCGGCGGGT
CCGGGGTGGG TCGTGCTCGG CGCGCTCAAG CAACTCGGCG GGGCGTTCCT GGCGTTCTAC
GTCACCGAGA AGATCGGCAA GTCCGTTGCC GACGAGCCGA TCCAGCAGTA CCTGCTGGGC
TTGAAGACCT TCGCCGCGCC CGTCGCGCTG GGCCTGGCCA CTTTCTTCGT GGTGCTCTCG
CAAGTCAAGA TCAATTCAAC GAACGCCTAT TCCGGATCGC TGTCCTGGTC CAACTTCTTC
TCCCGGGTCC TGCACAAGCA CCCCGGACGC GTCGTGTGGA TCTTTCTGAA TGTCGGCATC
TCGCTGGCGC TGATGGAGGG CGGGGTCTTC GGCTTCCTGA ACAACGTCCT CGGCTTCTAC
TCCAACGTCG CGATCGCTTG GATCGGCGCC GTCACCGCCG ACCTGGTGAT CAACAAGCCG
CTCAAACTCA GCCCGTCCTA CATCGAGTTC AAGCGCGCGC ACCTGTACAA CTTCAACCCG
GTCGGCTTCG GCTCCATGCT GATCGCCTCC GCGGTCTCGA TCGTCGCGTA CTTCAACGCC
TTCGGTGCGT ACGCCAAGGC CTTCTCTCCC CTGATCGCCC TCGGCATCGG CCTGGCCCTC
TCGCCGATCC TGGCGTACAC GACGAAGGGC AAGTACTACA TCGCCCGCGT GGACGGCCTC
GACGAGCCGC TGGTCGTGGA CGGCCTGCTG TCCTCCGTCG AGCTCACCTG CACGGTCTGC
ACGGACGCCT TCGAGCGGCC GGACATGGCA TCCTGCCCGT TCCACAGCGG TCCGATCTGC
TCGCTGTGCT GCAGCCTGGA GGCCGCGTGC CACGACGCGT GCAAGAAGAC CGGGTCCGGG
GCGGTCGACC TCGGTATGCC CGTCACCGCG ACCCCGGTGT GA
 
Protein sequence
MTDTDSSART GQASTGTTAT TSTGAKRAYH RWAKNDTLED YSLRYAPKSF RRWSPYVVAT 
TALGGIAYLA DFAIGGSIAI SYGFSSAAVA ILIAAVVIFA TGIPIAYYSA KYSVDMDLLT
RGAGFGYLGS TLTSIIYASF TFIFFALEGS IMAQAFQLGL HIPLAVSYLI ASLLVIPLVI
YGMTALSKMQ VWTQPIWLIM MVAPFLAIAV KDPGEFARFT HFGGDSPTGA GFSFLSAGAG
AGVALSLIAQ IGEQVDYLRF MPDKTEENKK QWWGAVLSAG PGWVVLGALK QLGGAFLAFY
VTEKIGKSVA DEPIQQYLLG LKTFAAPVAL GLATFFVVLS QVKINSTNAY SGSLSWSNFF
SRVLHKHPGR VVWIFLNVGI SLALMEGGVF GFLNNVLGFY SNVAIAWIGA VTADLVINKP
LKLSPSYIEF KRAHLYNFNP VGFGSMLIAS AVSIVAYFNA FGAYAKAFSP LIALGIGLAL
SPILAYTTKG KYYIARVDGL DEPLVVDGLL SSVELTCTVC TDAFERPDMA SCPFHSGPIC
SLCCSLEAAC HDACKKTGSG AVDLGMPVTA TPV