Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6434 |
Symbol | |
ID | 8337798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7425159 |
End bp | 7426961 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959534 |
Product | Chloride channel core |
Protein accession | YP_003117127 |
Protein GI | 256395563 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.741309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA TGTCCTCCCT CAGCGGCGCG GCGCGTCGGA CCTCCTCTCC TGTGTTGCCG GTGCCGACCC GTGGAGTCCT GCGCCGCCTC GTGGACGCCT TGGCGTCCGG GCGGAGCGGT TTGGTGGTGC TGGCGTTGGC GATCGGAGCC GGCGCCGGGG GCGGGGCGAT CGTGTTCCGT TGGCTCATCA CCTCCTTCAC GCACCTGTTC TCCGGGCATG CCGACTACTC CGACGCCGGG CACGCCGCCA ATCCGCACCT TTCGGCGCTG GGGATCTGGT TCGTGCTGCT CACGCCGGTG GTCGCCGGGC TGATCTACGG CCCGCTGGTG TACAAGTTCG CGCCGGAGGC TCGCGGGCAC GGCGTGCCGG AGGTGATGTA CGCGGTCGCG CGCAACAGCG GCCGGATCGC CCCGCAGGTC GCCGTGGTGA AGTCCTTGGC GTCGGCGTTG TGTATCGGCT CGGGCGGATC GGTGGGCCGT GAGGGACCGA TCGTCCAGAT CGGGTCGGCC CTCGGCTCGA CCCTGGGCCG GGTCGTCGGC GCCGGGGAGG ACCGGATGCG GCTGCTGGTG GCCTGCGGCG CGGCCGGAGG GATCGCGGCC ACCTTCAACG CGCCGCTGGC CGGAGTGTTC TTCGCGATGG AGCTGATCCT CACCTCCTTT GCCGCCGAGG GCTTCGGGAT GATCGTGCTG TCCTCGGTCA CCGCCTCGGT GATCGGTCGG GCGGCCTTCG GCAACGCGCC GTTCCTGACC CTGCCGCCAT TCCACGCCGC ACACGTGTCC CAGCTCGCGC TGTTCGCGGT ACTCGGCATC GGCGCGGGTA TCGTAGGCGT CGCCTTCTCG AAGATCCTCT ATGCGATCGA GGACGCCTGC GACTGGGCAT GGCGCTGGCC GGAGTGGGCC CGCCCGGCCG TCGGCGGTCT GTTGCTGGGC GTCGTGCTGC TGGTGCTGCC GCAGATGTAC GGGGTCGGAT ACCCGGTCCT GGAGAACGCG GTCGCCGGCA AATACGCGAT CGGATTCCTG CTGGTGCTGC TGATCGGGAA GGTCGTGGCC ACCAGCTTGA CCATCGGGAT CGGCGGATCC GGCGGAGTGT TCGCCCCCAG CTTGTTCATG GGGGCGATGG CCGGCTCGGC GTTCGGACTG GCCGCCCAGG ACCTCTTCGG GACGGGCGCC GGCCCGGTCG GTTCCTACGC GCTGGTCGGA ATGGGAGCGG TGTTCGCCGG GGCGGCCCGC GCACCGATCA CCGCGGTGGT CATCCTGTTC GAGCTGACCG GCGAGTACTC CATCATCCTG CCGCTGATGG CCGCGATCGT GCTGGCCACC TTGACCAGCA AAGCCATCAC CGGCGACACC ATCTACACCC TCAAGCTGCG CCGCCGCGGC GTAGACCTGT CCGCTCCGGC ACCGGCCTCG CCGTTCGCCG GGATCACCGT CGCCGAGGTG ATGGAGCCGG TCCCCGCCGC GCTCACGGCG ACCACCTCCC TGTCGCAGGC CGCGGACGCG CTGGCCGTCT CCCGGCACGG CGCGCTGCCC GTCACCGACG CCGACGGCTC CTTCCTCGGC GTCGCCACGG CCCGCGCGGT CGCCGAAGTC CTGTCCGAAG GCGGACACGA CACCGAACCG GTCGGCGAAG TCCTCTTCGT CCCCAAGCCG GTACACGCCG ACAACGACCT GGCCGGCGCC CTGGCCGAAC TGGTTGGGGC AACCCCCTCG GGTCTGCCGG TCCTCGACGA GACCGGCACC TGCCTGTCCG GATGGATCAC CCATCAGGCC GTGCTGGCGG CAGTCCATCG AGGTCCAGCC TGA
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Protein sequence | MQIMSSLSGA ARRTSSPVLP VPTRGVLRRL VDALASGRSG LVVLALAIGA GAGGGAIVFR WLITSFTHLF SGHADYSDAG HAANPHLSAL GIWFVLLTPV VAGLIYGPLV YKFAPEARGH GVPEVMYAVA RNSGRIAPQV AVVKSLASAL CIGSGGSVGR EGPIVQIGSA LGSTLGRVVG AGEDRMRLLV ACGAAGGIAA TFNAPLAGVF FAMELILTSF AAEGFGMIVL SSVTASVIGR AAFGNAPFLT LPPFHAAHVS QLALFAVLGI GAGIVGVAFS KILYAIEDAC DWAWRWPEWA RPAVGGLLLG VVLLVLPQMY GVGYPVLENA VAGKYAIGFL LVLLIGKVVA TSLTIGIGGS GGVFAPSLFM GAMAGSAFGL AAQDLFGTGA GPVGSYALVG MGAVFAGAAR APITAVVILF ELTGEYSIIL PLMAAIVLAT LTSKAITGDT IYTLKLRRRG VDLSAPAPAS PFAGITVAEV MEPVPAALTA TTSLSQAADA LAVSRHGALP VTDADGSFLG VATARAVAEV LSEGGHDTEP VGEVLFVPKP VHADNDLAGA LAELVGATPS GLPVLDETGT CLSGWITHQA VLAAVHRGPA
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