| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6417 |
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| Symbol | |
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| ID | 8337780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7407019 |
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| End bp | 7408167 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959518 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003117112 |
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| Protein GI | 256395548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00306649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.17574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCTC TGGCGTCGCT GTCCCTCCAC TGCCCCGCCT GCGACAACCG CTACGCCCTC
CACGACCTGG CCTGGCGCTG CACCGACTGC CACGGCGTCC TGGAACTGTC CGGCTTCGCC
CCCACGTTCC CCTCACCGGC CGACCTATCC CACCGCCCGC CGACCCTGTG GCGCTACGCC
GAGGCCCTCC CACTCGCCGA GCCCACCGCC ATCACCCTCG GCGAGGGCAT GACGCCGCTG
GTCACGGCAC CGGGCCGCTC GGACGTCCGC CTCAAGGTCG ACTACCTGAT GCCGACCGGC
TCGTTCAAGG ACCGCGGCGC CGTCCTGCTC GCCGCCCTCG CCGACAAGCT GTCCGCCGGC
CGCATGGTCG CCGACAGCAG CGGCAACGCC GGCACGGCCA TCGCCGCCTA CGCCGCTCGC
GCCGGCATCC CCTGCGAGGT CTACGTCCCG CAATCCACCT CAGCCGGCAA GGTCGCCCAA
CTCCGCGCCT ACGGCGCCGC CGTCCACCAG ATCCCCGGCT CCCGCGAGGA CACCGCCGAC
GCCGCAGCCG AGGCGGCGGA CGTCCCCGGC ACCCTCTACG CCAGCCACGT CTACAACCCC
TTCTTCTTCC ACGGCACCAA GACCTATGTC TTCGAGCTCT GGGAACAACT AGGCGGACGC
CTCCCGCACA CCCTGGTCCT CCCGGTCGGC AACGGCACCC TCGTCCTCGG CGCCCACCTC
GGAAGCCGCG AACTCCTCGC CGCAGGCCTG ATCGACCGCC TGCCCCGCAT CGTCGCCGTC
CAAGCCGCCA CCTGCGCACC CCTGGCCACA GCCTTCCAAG CCGGCCACGC CGAACCCGCG
CAGATCACCC CCGAACCAAC CCTCGCCGAA GGCATCGCCA TCGCCCGCCC AGCCCGCGGC
GCCCAAATCC TCGCCGCGAT CCGCGCCACC GGCGGCGTCA TCACCACGGT CACCGACGCG
CAGGTCAGCG CGTCGCACGC AGCGCTAGCC CGCGCCGGCT TGTACGTAGA ACCGACCGGC
GCAGCCTGTT GGGCAGCTCT CAGTGCAGGA CTCGTCGCGG AGCCCGAAAC GCCACGAGAC
CCGGCTGTGC CATTCGCAGT AGCCCCCCTG TGTGGCAGCG GCCTGAAATC AAAGCCCCCA
CACTCCTGA
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| Protein sequence | MNPLASLSLH CPACDNRYAL HDLAWRCTDC HGVLELSGFA PTFPSPADLS HRPPTLWRYA
EALPLAEPTA ITLGEGMTPL VTAPGRSDVR LKVDYLMPTG SFKDRGAVLL AALADKLSAG
RMVADSSGNA GTAIAAYAAR AGIPCEVYVP QSTSAGKVAQ LRAYGAAVHQ IPGSREDTAD
AAAEAADVPG TLYASHVYNP FFFHGTKTYV FELWEQLGGR LPHTLVLPVG NGTLVLGAHL
GSRELLAAGL IDRLPRIVAV QAATCAPLAT AFQAGHAEPA QITPEPTLAE GIAIARPARG
AQILAAIRAT GGVITTVTDA QVSASHAALA RAGLYVEPTG AACWAALSAG LVAEPETPRD
PAVPFAVAPL CGSGLKSKPP HS
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