| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6414 |
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| Symbol | ispG |
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| ID | 8337777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7401253 |
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| End bp | 7402368 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644959515 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003117109 |
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| Protein GI | 256395545 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0420679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCA TCGACATCGG ACTGCCGACC TTCCCGGCCG CGGAGGCGCG CGAGCGACGA
AGGATCAGCC GGCAGCTCGA CGTCGGCGGC GTGCCGGTGG GCGGGGGCGC GCCGGTGTCC
GTGCAGTCGA TGACGACCAC GCTGACCGCG GACGTCAACG CCACCCTGCA ACAGATCGCG
CAGCTCACCG CCGCCGGCTG CCAGATCGTC CGGGTCGCGG TGCCCTCGCA GGACGACGCC
GACGCCCTTC CCGCGATCGC GAAGAAGTCG CAGATCCCTG TCATCGCCGA CATCCATTTC
CAGCCGAAAT ACGTCTTCGC CGCCATCGAC GCCGGCTGCG CGGCCGTGCG CGTCAATCCC
GGCAACATCA AGGCTTTCGA CGACAAGGTC GGCGAGATCG CGCGCGCCGC CGAGGACGCC
GGGATCCCGA TCCGGATCGG GGTGAACGCG GGCTCCCTGG ACAAGCGGCT GTACGAGAAG
TACGGCAAGG CGACGCCCGA AGCCCTGGTC GAATCGGCGC TGTGGGAGTG CTCGCTGTTC
GAGGAACACG GGTTCCGGGA CATCAAGATC TCGGTGAAAC ACCACGACCC GCTGGTGATG
GTGGCGGCGT ACCGGCTGCT GTCGGAGCAG TGCGACTACC CGCTGCACCT GGGCGTCACC
GAGGCCGGGC CGCTGATGCA GGGCACGGTG AAGTCGGCAG TGGCGTTCGG CATCCTGCTG
TCGGAGGGCA TCGGGGACAC GATCCGGGTC TCGCTGTCGG CGCCGCCGGT GGAGGAGGTC
AAGGTCGGGA TCAGCATCCT GGAATCGCTC GGGCTGCGGC GGCGGCATCT GGAGATCGTG
TCGTGTCCGT CGTGCGGGCG CGCGCAGGTG GACGTGTACA AGTTGGCCGA GCGCGTGCAG
GCGGCGTTCG ACGGCTTCCC GCACCCGCTG CGCGTCGCGG TGATGGGCTG CGTGGTGAAC
GGTCCCGGCG AGGCGCGGGA GGCCGACATC GGCGTCTCCT CCGGCAACGG CAAGGGTCAG
ATCTTCGTGC GCGGCGAGGT CGTCCGCACG GTCCCCGAGG CGCAGATCGT CGAAGCGCTC
GTGGAGGAGG CGCTGGCCCT GTCCGAGGGG TCATGA
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| Protein sequence | MNAIDIGLPT FPAAEARERR RISRQLDVGG VPVGGGAPVS VQSMTTTLTA DVNATLQQIA
QLTAAGCQIV RVAVPSQDDA DALPAIAKKS QIPVIADIHF QPKYVFAAID AGCAAVRVNP
GNIKAFDDKV GEIARAAEDA GIPIRIGVNA GSLDKRLYEK YGKATPEALV ESALWECSLF
EEHGFRDIKI SVKHHDPLVM VAAYRLLSEQ CDYPLHLGVT EAGPLMQGTV KSAVAFGILL
SEGIGDTIRV SLSAPPVEEV KVGISILESL GLRRRHLEIV SCPSCGRAQV DVYKLAERVQ
AAFDGFPHPL RVAVMGCVVN GPGEAREADI GVSSGNGKGQ IFVRGEVVRT VPEAQIVEAL
VEEALALSEG S
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