| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6413 |
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| Symbol | |
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| ID | 8337776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7400489 |
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| End bp | 7401256 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959514 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003117108 |
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| Protein GI | 256395544 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0597317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGG GCGTCGCCCT GGTGACCGGC GCCTCGTCGG GCATCGGGGC GGTGACCGCC
GCCGCGCTGG CCCGCCGCGG CTACCGCGTC GTGGTCCACG GCCGCGACGA ACGTGCCACC
GCCGGCGTCG CGATGGCCGT GAACGGCGTC CCCGTCTGCG CCGACCTTGC GCACGCCGGC
GAAGCCGAAC GCCTCGCCAC CCGTGCCCTG GAAGTCGGCG ACGGCCGCAT CGAGGTCCTG
GTGAACAACG CGGGCTTCGG CTGGCACGGC GACTTCCGCA CGATGCCCAA AGGCACCGCC
GACCGCCTCC TCGCCGTGAA CCTCGCCGCC CCGATCGCCC TGACCCGCGC ACTGCTCCCG
GCGATGCGCG AGCACAACGC GGGCCGCGTG GTGTTCGTCA GCTCCATCGC CGGCCGCCTC
GGCGTCGGCG GCGAAGCGGT GTACGCGGCG AGCAAAGCAG GCCTCGACTG CTTCGCGGAC
AGCCTGCGCG GCGAACTGCG CGAGACCGGA ATACGAATCG GCGTGGTGGT GGCAGGCGTG
ATCGCGACAC CCTTCTTCGA CCGCCGCGGC ACCCCCTACG CCCGCCGCTG GCCGAAACCG
ATCCCGACGG AGGCCGCCGC CGAGGCGGTG ATGCGGTGCG TGGAGCGGGG CACGGCGGAG
GTGTACGTGC CCCGCTGGTT GCGCGTGCCG GTGGTGGTGC AGGGGGTGGC GCCGGGGGTT
TATCGGTGGT TGGAGGGGCG GTTCGGGGGC GAGGGCGGGA CTAGGTGA
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| Protein sequence | MSRGVALVTG ASSGIGAVTA AALARRGYRV VVHGRDERAT AGVAMAVNGV PVCADLAHAG
EAERLATRAL EVGDGRIEVL VNNAGFGWHG DFRTMPKGTA DRLLAVNLAA PIALTRALLP
AMREHNAGRV VFVSSIAGRL GVGGEAVYAA SKAGLDCFAD SLRGELRETG IRIGVVVAGV
IATPFFDRRG TPYARRWPKP IPTEAAAEAV MRCVERGTAE VYVPRWLRVP VVVQGVAPGV
YRWLEGRFGG EGGTR
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