| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6410 |
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| Symbol | |
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| ID | 8337773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7393130 |
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| End bp | 7396042 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959511 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003117105 |
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| Protein GI | 256395541 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.112311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG GGCTTTTGGG TCCGCTCGAC GTGCGCGTCG AGGATGACAT GCCGGTCAGT
GTGGCCGCTC CTATGCAGCG GGCCGTATTG GCGGCGCTGC TGTTGCATCA GGGGCGGCCG
CTGACGCTGG ACAGCTTGAT CGACGTTCTG TGGGACGGTC GGGCGCCGGC GAGTTCGCGG
ATGACCGCGG TCAACTATGT CGCTCGGTTG CGGCGGTCGG TGGGTCCGGA TGTGGCCGCG
CGATTACAGA CCAGTCCTGC CGGCTATCTG GTGAGGCTCG CGGGTGACGC CGAGCTGGAC
AGTCTGGAGG CTTCCGGGCT GGAGCGGCGG GCTCTGGACC GGTCGCGGGT CGGGGACTGG
TCCGCGGTCG CGACGGCGGC GGGGCGGGCC CTGGCTCTGT GGCGCGGTGA GCCGTTGCAG
GATCTGCCCG CGACCCGGCT GCAGCGCGAC CATCTTCCGG CACTGGCCGC ACTCCGGCTG
CGGCTGCGGG AACTCGCTGC CGATGCCGCG GTGCACCTCG GCGAGTACGA GCAAGCCGCC
GCTGATCTCA CCGAGTTGCT GCGCGACCAT TCGCTGAACG AGCGCCTGTA TGAGCTTCTC
GTGGTCGCGC TCTACGGCTC GGGGCGACGC GCCGATGCGC TGGAGGCGTT TCAGCAGGCG
CGCCGGACGC TGAGCGCGGA GCTGGGGGTC GATCCGACGC CGCGGCTTCA GGCGCTGCAG
CAAGGGATTC TGGCCGGTGC GAGCCACGGC ACGGTGCTGA ATCTGTTGGC CGCCGACGGG
CGGTCCGCGG GCACGAGTCC GGCGCGCGCC GTCACCTCGA TCAGTGGTGC GCAGGCGGTG
GTGCCCCGGC AGCTGCCCGC CGCGACCCGG TATTTCAGCG GGCGGGCGCA GAGTCTGGCG
GCGTTGACGG CGCTGGCCGA CGAGGTCGTC TCCGACGAGG CTGCCCACGA CGCCGCCACC
TTGGACGCCG CCGACCGCGA CGGCGCGGCC ATCGCCGTCA TCGCGGGCAT GGCCGGCATC
GGCAAAACGA CGCTGGCCGT CCAGTGGGCC CACCGAGCCG CCTCCCGCTT CTCGGACGGT
CAGCTCTACA TCAACCTGCG CGGCTTCGAT CCCGGCGGCG CCCCGGTCGC CCCCGACCAC
GCGATTCGCG TGTTCCTGGA GGCGTTCGGC ATACCGCCGG CGCGGATTCC GACCACCGCG
CAGGCGCGGG CCGGGCTCTA CCGGAGCCTG GTCGCCGATC GCAGGGTCCT GATTCTTCTC
GACAACGCGC GCGACGTCGA GCAGGTCCGT CCCCTGCTGC CGGGCACCCC GGCGTGCCTG
GTGCTGGTGA CCAGTCGCAA CCGGCTCACC GGGCTGGTGA CGGCCGAGGG CGCGCACTGG
ATCCCGCTCG ACCTGCCGGA CCCGCCGCAG GCGCGGGAGC TGCTGGCGCG GCGGCTGGGC
TCTGATGTGG TCGCCGAGCA GCCGGAGGCG ATCGCCGAAC TGGTCGAGCT CACCGCCCGG
CTTCCGCTGG CGCTGAGCGT GGCCGGGGCG CGGCTGGCGA TGAACCCGCT GCTGCCGGTC
TCGGCATTCC TGGCCAGCCT GCGCACCACG CGGAGCCGGC TCACCGTGCT GAACGGCGGG
GATATCACCA CCGATCTGCG GGCCGTGTTC TCGTGGTCCT ACCAGCAGCT GGCACCGGCC
GCGGCGCGGA TGTTCCGGCT GGTGAGCCTG TACCCCGGTC CGGACGTCTC CCTGGCGGCG
GCCGCGAGCC TGGCCGGCCT GGAAGCCGCG GAGGCCAGGG CGGCGTTGGC GGAGCTGACC
GCCGCGAACC TGATCACCGA GCCCGCGCCG GACCGGTTCG CCTGTCACGA CCTGCTGCGC
GCCTACGCCG CCGAACTCGC CGACGCCCCG GCGGAGCGGG AGCTGCGATC GGCGGCGTTC
GCGCGGATGC TCGACCACTA CCTGCACTCC GCCTATCGGG CGTCGATGGT CCTGGCGTCG
CATCGGGACC CGGTCGAGGT CGGTGATCCG CAGCCTGGCG TGGCGGTGGA GGATTTCCCC
GACAAGGCTG CGGCCACGGC GTGGTTCACC GCCGAGCACC TGGCGCTCCC CGCCGTCATC
GCTCGGGCGG CCGATACCGG CTTCGACGTC CACGCCTGGC AGACCGCGTG GGCCGGCTAC
GTGTTCTTCA ACGTGCACCG GTATTGGAAC GACATGCTGG AGACGCTGGT GATCGGTCTG
GACGCCGCCG AGCGGCTGGG CGACGAATAC GCCCAAGGAC TCGTGCTGCG TCCGCTCGGC
GGAGTGTCCG ACAAGCTCGG CCGGGAGGAC GAAGCGCAAG CCTACCTGGG GCGGGCTCAC
GTCCTGCTGG TCAAACTGGA CGAGCCCTTG GGCCATGCGC ACGTCCACTT GAGCATGGGC
CAATCCGCCT ATCGGCGCGG CCGCTACGCG GAGGCTCTCG AGCACAGCGA GAAGTGCTTG
AACCACGTCA CCCGCGCCGG ATCCGGACTG GGCCAGGCGA CCGCGCTCGG GTCGCTGGTC
TCCTGCCACG TCGCCCTCGG CGACCTCGAC GCGGCCCGCG CCGCCGGCGA GCGCTCGCTG
GCCCTGTACC GGGAGTTCGG CTCGCCGATC AGCGCCGGCA ACACCTTTCT CAGCCTGGCG
GACATCGAGG TCGCCGGCGG CGACTACCCG CGGGCCGCCG AGCTCTGCCG CCGGGCCGCC
GAGGTCTTCG CCGGGCACGG CGCGCGCCAC TACGTCGCCA AAGCCCTGAC TCAGCTCGGC
GACGTCTTGG ACAAGGACGG CGACCAGGGC TCCGCGCTGT CGGCGTGGCG CGAAGCCCTG
GAGGCGGTCG ACCAGCTGGA CAGCTCCGAC GCGGACGGCA TCCGGGGCGG GCTGCGTGAC
CGGCTGCGCG AACGCGGTCA GGTCGTGCCG TAG
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| Protein sequence | MRFGLLGPLD VRVEDDMPVS VAAPMQRAVL AALLLHQGRP LTLDSLIDVL WDGRAPASSR
MTAVNYVARL RRSVGPDVAA RLQTSPAGYL VRLAGDAELD SLEASGLERR ALDRSRVGDW
SAVATAAGRA LALWRGEPLQ DLPATRLQRD HLPALAALRL RLRELAADAA VHLGEYEQAA
ADLTELLRDH SLNERLYELL VVALYGSGRR ADALEAFQQA RRTLSAELGV DPTPRLQALQ
QGILAGASHG TVLNLLAADG RSAGTSPARA VTSISGAQAV VPRQLPAATR YFSGRAQSLA
ALTALADEVV SDEAAHDAAT LDAADRDGAA IAVIAGMAGI GKTTLAVQWA HRAASRFSDG
QLYINLRGFD PGGAPVAPDH AIRVFLEAFG IPPARIPTTA QARAGLYRSL VADRRVLILL
DNARDVEQVR PLLPGTPACL VLVTSRNRLT GLVTAEGAHW IPLDLPDPPQ ARELLARRLG
SDVVAEQPEA IAELVELTAR LPLALSVAGA RLAMNPLLPV SAFLASLRTT RSRLTVLNGG
DITTDLRAVF SWSYQQLAPA AARMFRLVSL YPGPDVSLAA AASLAGLEAA EARAALAELT
AANLITEPAP DRFACHDLLR AYAAELADAP AERELRSAAF ARMLDHYLHS AYRASMVLAS
HRDPVEVGDP QPGVAVEDFP DKAAATAWFT AEHLALPAVI ARAADTGFDV HAWQTAWAGY
VFFNVHRYWN DMLETLVIGL DAAERLGDEY AQGLVLRPLG GVSDKLGRED EAQAYLGRAH
VLLVKLDEPL GHAHVHLSMG QSAYRRGRYA EALEHSEKCL NHVTRAGSGL GQATALGSLV
SCHVALGDLD AARAAGERSL ALYREFGSPI SAGNTFLSLA DIEVAGGDYP RAAELCRRAA
EVFAGHGARH YVAKALTQLG DVLDKDGDQG SALSAWREAL EAVDQLDSSD ADGIRGGLRD
RLRERGQVVP
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