Gene Caci_6406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6406 
Symbol 
ID8337769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7378130 
End bp7378636 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID644959507 
Productmethionine sulfoxide reductase A 
Protein accessionYP_003117101 
Protein GI256395537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0595375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.568144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG AGAGGGCGAT TCTTGCCGGA GGCTGCTTCT GGGGGATGGA GGAGCTCCTC 
CGGCGTGAGC CTGGTGTTGT TTCTACGCGG GTCGGGTACT CCGGTGGGGA TACGCCGAAT
GCTACGTACC GCAATCATGG TGACCATGCG GAGTCGATTG AGATCGGGTA TGACCCTGAG
GTGACCGATT ATCGGGCGCT GCTGGAGTTC TTCTTTCAGA TCCATGACCC GACGACGCGG
GATCGGCAGG GCGAGGACCG GGGGCGGAGC TACCGGTCGG CGATCTTCTA CCTGAACGAT
GAGCAGAAGC GCGTTGCTGA GGACACCATT GCGGATGTCG AGGCCTCGGG GTTGTGGCCG
GGCAAGGTCG TTACCGAGGT CACGCCTGCG GGCGACTTCT GGGAGGCCGA GCCAGAGCAC
CAGGACTACC TGCAGCGGTA TCCGAACGGC TACACCTGCC ACTACCCGCG GCCGAACTGG
AAGCTGCCTC GGCGGGCCGA GGCATAG
 
Protein sequence
MATERAILAG GCFWGMEELL RREPGVVSTR VGYSGGDTPN ATYRNHGDHA ESIEIGYDPE 
VTDYRALLEF FFQIHDPTTR DRQGEDRGRS YRSAIFYLND EQKRVAEDTI ADVEASGLWP
GKVVTEVTPA GDFWEAEPEH QDYLQRYPNG YTCHYPRPNW KLPRRAEA