Gene Caci_6402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6402 
Symbol 
ID8337765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7370246 
End bp7371445 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID644959503 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003117097 
Protein GI256395533 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.605553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCA TAGAGATCCT CGACACCGCC GTGGTCGGTG CCGGGCCCTA TGGTCTCTCG 
GTGGCGGCGC ACGCCAAGGC GCGTGGCTCC CGCACCCGGG TGTTCGGCAC GCCGATGCGG
GCCTGGGCCG AGCACATGCC GCTGGGCATG AAGCTCAAGT CGGAGCCGTG GGCCTCCCAC
CTGTCGGATC CGCGCGACAA GTACACGCTG AAGGAGTACT GCCGCATCGA GGGACTGCCT
TACGGGCACG GCATTCCCAC GCCGGTCGAG ACGTTCGTCG CCTACGGCCG CTGGTTCCGC
GAGCAGACCG CACCGGACCT GCACGAGACC GACGTGGTGC GCGTCGACCG CGAGGGCTCG
GCGTTCGCCC TGCAACTGGC CGACGGATCC TCGGTGCGCT CGCGCTCAGT GGTCCTCGCC
ACCGGCTTCC TGCCCTTCCC CCGCTTCCCC GAGGCGCTCG CCGGACTCGG CGCGCCGCAG
GTGCTGCACA GCAGCGCGGT GAACGACCTG TCCGGCTTCG CCGGCAAGCA GGTCACCGTG
GTCGGCGCGG GGCAGGCGGC GATCGAGATC TCGGTCCTGC TGGACGAGGC GGGCGCGGAC
GTGACGCTGG TGGCGCGGAC CGGGGCGCTG GCTTGGAACA GCTTGCCGGG CGATCTGCCC
TCGACTTTGT GGCAGCGGTT GCGCAAGCCG GAGAACGGGC TCGGGCCGGG GTACTACAAC
TTGGTGTTGG GGGATCTGCC CGCCGTGTTC CGGCGGCTGC CCGCGGGATA CCGCATGGAA
GTCGTCCGCA AGACGCTGGG CCCTGAGGGT TCGTGGTGGG TCCGCGAGCG GTTTGAGAAG
TCTTTCGACA CCGAGCACAT CCGCATCGGG ACCCGGATCA CCTCTGCGAA GCCCGACGGC
GACGCGCTCC TGCTGGAGCT GTCCGACGGC CGGGAGCTCA AGACAGACCA CGTAATTGCC
GCGACCGGTT TCGAGGTCGA TGTCCGGAAT CTGACGATGC TCGGCGAGGA GCTGCGCCGG
CGGGTGCGCG GCATGCGCGG ATCGTACGGT CCGCCGATGC TCGGTGCGGG CTTCGACTCC
TCGGTCCCCG GGTTGCACCT GGTCGGGCTG GCGTCGGCGG CGACGTTCGG GCCCTCCATG
CGCTTCGTGT TCGGGTCCGC GTTTGCCGCC CGCACCGTCG CGCCGCGGCT GCCGCACTGA
 
Protein sequence
MTGIEILDTA VVGAGPYGLS VAAHAKARGS RTRVFGTPMR AWAEHMPLGM KLKSEPWASH 
LSDPRDKYTL KEYCRIEGLP YGHGIPTPVE TFVAYGRWFR EQTAPDLHET DVVRVDREGS
AFALQLADGS SVRSRSVVLA TGFLPFPRFP EALAGLGAPQ VLHSSAVNDL SGFAGKQVTV
VGAGQAAIEI SVLLDEAGAD VTLVARTGAL AWNSLPGDLP STLWQRLRKP ENGLGPGYYN
LVLGDLPAVF RRLPAGYRME VVRKTLGPEG SWWVRERFEK SFDTEHIRIG TRITSAKPDG
DALLLELSDG RELKTDHVIA ATGFEVDVRN LTMLGEELRR RVRGMRGSYG PPMLGAGFDS
SVPGLHLVGL ASAATFGPSM RFVFGSAFAA RTVAPRLPH