Gene Caci_6398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6398 
Symbol 
ID8337761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7365452 
End bp7366240 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID644959499 
Productglycosyl transferase family 2 
Protein accessionYP_003117093 
Protein GI256395529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.855353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG CCAAGACGCC GCGGGTGTCC GTGGTCATCC CGTGCGCCCC GCAGCAGCCC 
TATCTCGAGG AGACGCTGCT CTCCGTCCAG AAGCAGACCT TCCAGGACTG GGAGGTCGTC
CTGGTGCTGG ACGGCGAGTG CGAGGAGAAC CGGCGCATGG CCGCCGTGCT CCCCGACGAC
CGGATCCAGA TCGTCGTCAC CGCGCGCCCC CGCTCCGGCA TCGCCGCGGC CCGCAACGCC
GGCCTGCCCG TGTGCCGCGG CGACCTGGTG GCGTTCTGCG ACGGGGACGA CCTCTGCGAA
CCGGAGCGGC TGGCCCACCA GGTCGCCGAG TTCGACCGCC GTCCCGCTCT GGGGATGCTC
GCCACCTGGT CCCGCCGCTT CGACAGCGCC ACCGGCGCGG ACCTCGGCCC GCGCCGCTGC
CCCTCCGACT CCGAGGAGCT GGCCCGCAAG CTGTTGCTGT TCAACACGGT GACGGTTTCC
ACCGTGATGG CGCGCCCGGA GGTCGTGCGC GAGGCCGGGA ACTTCCGCGA CGCCGCGATT
CAGTGCGAGG ACTACGACCT CTGGCTCCGG ATCCTCGGCC GCGCCGAGGT GGCCGCGCTG
CCGGAGGAGC TGGTGCGCTA CCGCGTGCAC GAGGGACAGT TCAGCCACCG GGCGAAGATC
ATGCCGCAGA GCGGCCTGCT GCGCCGCGAG AAGCTGGCGG CCGCGCGGCG GCTGGGGTGG
AGCGTTTCGG TGGCACGGAT CAAGCACCTG GCGTGGGTCG GGGTGCAGCT GGCGAACCGG
CGCTTTTAG
 
Protein sequence
MSAAKTPRVS VVIPCAPQQP YLEETLLSVQ KQTFQDWEVV LVLDGECEEN RRMAAVLPDD 
RIQIVVTARP RSGIAAARNA GLPVCRGDLV AFCDGDDLCE PERLAHQVAE FDRRPALGML
ATWSRRFDSA TGADLGPRRC PSDSEELARK LLLFNTVTVS TVMARPEVVR EAGNFRDAAI
QCEDYDLWLR ILGRAEVAAL PEELVRYRVH EGQFSHRAKI MPQSGLLRRE KLAAARRLGW
SVSVARIKHL AWVGVQLANR RF