Gene Caci_6395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6395 
Symbol 
ID8337758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7361909 
End bp7363081 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content70% 
IMG OID644959496 
Productglycosyl transferase group 1 
Protein accessionYP_003117090 
Protein GI256395526 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.229647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CCGCCGCCGG ACCACTCAAA GTCCTTCTCG TCAGCCACTA CTACCCGCCG 
CACATGGGCG GCATAGAGAA CGTGGTGCAC TCCGAAGCCC GGTACCTGAC CGCCGCGGGG
GTGCAGGTGA CGGTCCTGAC GAGCGGGGAG CGGAGCAGCG TCACCGACGA GGACGGGGTC
CGCGTGGTGC GGGTCCGGGC TTGGAACGGC CTGGAGCGCA AGGCCGGAGT GCCGTTCCCG
ATCCTGGGAC CGAAGCTTCT GCGCCGCGCG CTGCGCTGGG CACGGTGGGC CGACGTGGTG
CACATCCACG ACGCCTTCTA TCAGACCTCG TGGGCCGCGC TCACGGCGGC GAAGCTGACC
GGTACCCCGA CGGTGGCCAC GCAGCACGTC GCGCTGGTGC ACCACGACTC GGCAGCCGTC
GGCCTGGTGC AGAAAGCGGT CTACGCGAGC GCCGGACGGC TGCTCATGCG GACCGCGCGC
ACTGTCCTCA CGATGAACTC CGACGTCGCC GCCTTCGTCC GCGGCCTCGG CGCGCGGCCG
GAGCGGATAC GACACCTGCC GAACGGTACC GACACCGCGT TGTTCCGCCC GGTCCGGGAC
GCCGCCGAGC AGGCCGCCGA ACGCGAGCGG CTGGGACTGC CGGCCGAGGG CGTGCTGGTC
CTGTTCGTCG GGCGGTTTGT GCCCAAAAAG GGTTTCGATC TGCTGCTCGC GGCTCAAGAT
CCGGGATACC ACTTGGTGTT CGCCGGCGGG CCTGCCGAAG CGCTGTCCGG CGCGGGGGAC
TCCGCGATCT ACCTCGGTTC CCTCTCCCCC GCCGACGTGG CCGCGGCATA CCGGGCCTGC
GACGTCTTCG CCCTGCCCTC GACCTCCGAG GGGTTCCCGC TCACCGTCCA GGAGGCGATG
AGTTCCGGGC TCGCCGTCGT CACCACCGAC GACAGCGGGT ACGCGGCCTA CGACCTGGAT
CGTGATCGCG TATCGTTGGT GGACCGGGAC ACGGAGACGC TCCGCGTCCG GCTACGGGAG
ATAGCCGCGG ACTCCGAGCT GCGCCGGCAG ATGGGCAAGT ACGCCCGGGA GTACGCGGTG
GAGTGTTTCG CGTGGCCGGA CCACGCCTCC AAGCTGATCG AGACCTACCG TTCGGCGATC
CGCCCGGGGA CGAGTTCCGC CGACCGGGGA TGA
 
Protein sequence
MSEAAAGPLK VLLVSHYYPP HMGGIENVVH SEARYLTAAG VQVTVLTSGE RSSVTDEDGV 
RVVRVRAWNG LERKAGVPFP ILGPKLLRRA LRWARWADVV HIHDAFYQTS WAALTAAKLT
GTPTVATQHV ALVHHDSAAV GLVQKAVYAS AGRLLMRTAR TVLTMNSDVA AFVRGLGARP
ERIRHLPNGT DTALFRPVRD AAEQAAERER LGLPAEGVLV LFVGRFVPKK GFDLLLAAQD
PGYHLVFAGG PAEALSGAGD SAIYLGSLSP ADVAAAYRAC DVFALPSTSE GFPLTVQEAM
SSGLAVVTTD DSGYAAYDLD RDRVSLVDRD TETLRVRLRE IAADSELRRQ MGKYAREYAV
ECFAWPDHAS KLIETYRSAI RPGTSSADRG