Gene Caci_6379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6379 
Symbol 
ID8337742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7341411 
End bp7342130 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID644959480 
Producthypothetical protein 
Protein accessionYP_003117074 
Protein GI256395510 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.111259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACG ATGCCGACGC CTTCACCCGA AGTGCCTCCT CGGCCTGGCA ACCGGTTCCA 
CACTATGTCG CTTACCGCAA CACCCGCGAG CGCGTCACAG CCCTGATCCA GGCCCATCCG
GACTCCGAGG GCCGGCCGGT GCCGGCCTGT CCGGGCTGGA CCGTCGGGCG GCTGCTGACG
CACATCGTGG AGAACTGCCG GTTCGCGGAG ACGAACACCG CCACCCCCGA GTTGTCCGAC
CGGCCGCTGT GCCTGGACGC GCCCAGCACC GCCGAGCTGC TCAGCGAATG GGCTCGCAGT
GCCGCCGTCG TCGAGCAGGC GGTGTCCAAG CTGCCGGGCC CGGCAGCCGG CTCCCTGCTG
CTCATGGACG CCTTCACCCA CGAGTACGAC GCGCGCGTCG CGCTGGACAC CCCGCTGCCC
CATGACCACC CCGCCTTCCC CGGAGCCTTC GAGGTGGCGC TCACCGGGTT TGCCGGGGCG
GTCCTGTGGC GCGGGCTGCC GACGCTGCGC ATCGAGACCG AGGACTTCTC CCGGAACATC
GGCAAGGGCC GGCCCGAGGC GGTCCTGCGC GGCAGCCGGG TCGACGTGTA CCGCTCGCTG
GTCGGGCGCC GTACGCCCTA CCAGATCGCC GCCCTGGACT GGAGCGCCGA CCCGCGGCCG
TGGATGCCGG CGTTCGGCTG GGGACCGTTC ACCCCTCCTG CCGAGCCGGT GGAACGCTGA
 
Protein sequence
MAYDADAFTR SASSAWQPVP HYVAYRNTRE RVTALIQAHP DSEGRPVPAC PGWTVGRLLT 
HIVENCRFAE TNTATPELSD RPLCLDAPST AELLSEWARS AAVVEQAVSK LPGPAAGSLL
LMDAFTHEYD ARVALDTPLP HDHPAFPGAF EVALTGFAGA VLWRGLPTLR IETEDFSRNI
GKGRPEAVLR GSRVDVYRSL VGRRTPYQIA ALDWSADPRP WMPAFGWGPF TPPAEPVER