| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6376 |
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| Symbol | |
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| ID | 8337739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7337545 |
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| End bp | 7338600 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959477 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003117071 |
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| Protein GI | 256395507 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.125635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA CGAACACCCG GCCCGCGGAC ACCCCGCCGG CCGCCGTCGA GCGGGCCGGC
CCGGCCACGC CGCGTGACGA CGACGAGTTC GTCCGGCTTG TCGAGCCCTA CCGGCGCGAG
CTGCTGGTGC ACTGCTACCG CATGCTCGGC TCGGTGCACG ACGCCGAGGA CCTGGTCCAG
GAGACGTATC TGCGCGCCTG GCGCGGCTAC GACCGGTTCG AGGGGCGCTC CTCGCTGCGC
ATCTGGCTGT ACCGGATCGC GACCAGCGCC TGCCTGACCG CCTTGGAGCA CCGCAGCCGC
AAGGTACTGC CGACGGGCCT GGGCGGTCCG GACGCCGAGG CCAACCGGCC CGGCCCGACG
CCCGGCACCG GCGAGGTGGA GTGGCTCCAG CCGCTGCCCG ACCTGCCGGG GAACGACCCG
GCGGCGATCG TGGCGGTGCG GGATTCGGTG CGTCTGGCGT TCATCGCCGC GTTGCAGCAC
CTGTCGGCCA AGCAGCGCGC GGTGCTGATC CTGCGCGACG TGATGGACTG GCACGCCGCC
GAGGTCGCGG ACCTGCTGGA CACCACGACG ATCGCGGTGA ACAGCGCGCT GCGCCGCGCC
CGGGCCCAGC TGGAGAAGGC CGCGCCCAGC GACGACGAGC TGACCGAGCC GGACGACCCG
CGCCGCCTGG CCATGCTCGA GCAGTACACG ACCGCCTTCG AGAACGCCGA CGTCCCCGGA
CTGGTGCGGC TGCTGCGCGA CGAGGTCGTG CTGGAGATGC CGCCGAACCT GTTCTGGTTC
GAAGGACGCG GGAACGTCAC CCGCTTCCTG GACACCAGAG TCCTCGGCGG GCGCCCGTTC
GCCATGCTCC GGATCTCCGC GAACGGCCAG CCGGCCGCCG CCGGTTACCT GGCCGGGACC
GACGGACGCT GGCACGCCCA CGCGATCCAC GTGCTGACCA TGACGGTCAC CGGCATCTCG
CACATCGTCT CGTTCAACGA TCCGAGCCTG TTCGACGGCT TCGGACTGCC CGCCGTGCTG
GACGGCGTGG CCGGTGCCGG CCCATGGCGG CCCTGA
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| Protein sequence | MIDTNTRPAD TPPAAVERAG PATPRDDDEF VRLVEPYRRE LLVHCYRMLG SVHDAEDLVQ
ETYLRAWRGY DRFEGRSSLR IWLYRIATSA CLTALEHRSR KVLPTGLGGP DAEANRPGPT
PGTGEVEWLQ PLPDLPGNDP AAIVAVRDSV RLAFIAALQH LSAKQRAVLI LRDVMDWHAA
EVADLLDTTT IAVNSALRRA RAQLEKAAPS DDELTEPDDP RRLAMLEQYT TAFENADVPG
LVRLLRDEVV LEMPPNLFWF EGRGNVTRFL DTRVLGGRPF AMLRISANGQ PAAAGYLAGT
DGRWHAHAIH VLTMTVTGIS HIVSFNDPSL FDGFGLPAVL DGVAGAGPWR P
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