Gene Caci_6356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6356 
Symbol 
ID8337719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7310439 
End bp7310972 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID644959457 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003117051 
Protein GI256395487 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0933407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACGT TGATCGTGAG CAGCCTGGTG ACCGCCGACG GCATCCACGG CGATCCCCAG 
TTGTGGGCCG GAGAGTACTC GGATGAGGAG GCCGTCGAGC AGTGGCTCGG CGCGTTGAAG
AAGAGCGACG CGTTCTTGAT GGGCAAGAAC ACCTACGAGT TGTTCGTGCA GATGTGGGGC
ACTCCCGAGG GTCCGTACCT CGAGCGTCTT CACGAAATGC CCAAGTATGT CTACTCATCC
ACGCTGACGT CGGCGGACTG GGCCAACACG ACGATCGTCT CCGGCGACGC CGTGGCCGCC
GTGCGGGAGC TGAAGGAGCA GGGCGACGGG GACCTGATGG TCTACGGCTA CGGCCGGCTG
TCGCAGGCAC TGCTGGAGGC CGGGCTGGTC GACCGGCTGG ACTTCACGGT GAACCCGGTC
GTGTTCGGCA GCGGGACCCC GCTGTTCCGC CCGGGCAAGC GCGTGAATCT GCGGCTGGAC
TCCGTCAGCC GGCGGGGCAA CGGCGCGGTC GCGCTGTCGT ACGTGCCCGC GTGA
 
Protein sequence
MRTLIVSSLV TADGIHGDPQ LWAGEYSDEE AVEQWLGALK KSDAFLMGKN TYELFVQMWG 
TPEGPYLERL HEMPKYVYSS TLTSADWANT TIVSGDAVAA VRELKEQGDG DLMVYGYGRL
SQALLEAGLV DRLDFTVNPV VFGSGTPLFR PGKRVNLRLD SVSRRGNGAV ALSYVPA