Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6352 |
Symbol | |
ID | 8337715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7305182 |
End bp | 7306492 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644959453 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003117047 |
Protein GI | 256395483 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00105497 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCCA CTTCGATCCC CGCCGCCCCA TTGGGCGGCC ACAGCCTGCT CGTGCTCGTC ATCACGGCCG GCGCGCTGCT GGTTCTGGCC ATGCTGCTGG GCCGGCTGGC CGCGCGCTTC GGATTGCCGG CGGTGTGCGG CGAGCTGTGC GCCGGGCTGA TCCTCGGGCC CTCGCTGCTG GGCCACACCG TCCCGCGCTT CTACCACTGG CTGTTCCCGC CGCAGGCCGA GCAGGTGCAC CTGCTCGACG GAGTCGCGCA GTTCGGCGTG CTGCTGCTGG TCGGTCTGAC CGGCGTGGAC ATCGACCTGA AACTGGTGCG CCGGCGCGGC CGGGTCGCGT TGTGGGTGGC CGGGTTCGGC CTGGTGCTGC CGCTGGTGAT GGGACTGGCG GCCGGGCGGC TGGCGCCGTC CTCGCTGCTG GGCCATGGCG GCGACCGCAC GTCCTTCGCG CTGTTCGCGG GCGTGGCGAT GTGTGTCAGC GCCCTGCCGG TGATCGCCAA GACTCTGGAC GACATGGGTC TGCTGCACCG CGACTTCGGC CAGCTCACCG TCGCCGCCGG GGTCGCCGAC GACGTCGCCG GCTGGCTGCT GCTGTCGGTG GTCTCGGCGC TGGCGGCGAC CGGCGGCGCG CACCGCTTCC CGTGGCAGGC GATGCTCTGG CTCGTGGTGA TCGTGCTCGG CGCGGTGCTG ATCGCCCGCA CGCTCGCACC GCGGGTGCTG CGGCGCGCCG GTCGCGGCTC GACGCCGGGA CCGGTCGTCG CGACCGTGGT GGCGGTGTTC CTGGGCTGCG CCGCCGCGAC GCAGGCGGCC GGGCTGGAGG CCTCGTTCGG GGCGTTCGTC GGCGGACTGG TCGTCGGGAC CGCGGCCGAG GCCGACCTGC GCTGGCTGGC GCCGCTGCGG ACGGTGGTGG CCTCGGTCCT GGCGCCGCTG TTCTTCGCCA CCGCCGCGCT GCGCGTGGAC CTCGGGGTCC TGCGGGACCC GGTGATCCTG GGCGCGGCGC TCGTGGCGGT CGCCATCGCG GCCGTCGGCA AGTTCGCCGG CGCCTACCTC GGCGGCATGA CCGCGAAGCT GGACCGCTGG GAGTCCCTCG CCCTGGGCGC CGGGATGAAC GCCCGCGGCG TCATCCAGCT CATCGTGGCC TCGGTGGGGC TGCGGATCGG GGTGCTGAAC ACCGACTCCT ACACCATCGT GGTGCTGGTG GCGGTGACCA CCTCGCTCAT GGCGCCGCCG ATCCTGCGCC TTGCTCAGGG CAGGATCGGC GGCACTCCGG CGGAAGAGGA ACGCAGGGTC AGGCTCGCCG CTATGCGGTG A
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Protein sequence | MPSTSIPAAP LGGHSLLVLV ITAGALLVLA MLLGRLAARF GLPAVCGELC AGLILGPSLL GHTVPRFYHW LFPPQAEQVH LLDGVAQFGV LLLVGLTGVD IDLKLVRRRG RVALWVAGFG LVLPLVMGLA AGRLAPSSLL GHGGDRTSFA LFAGVAMCVS ALPVIAKTLD DMGLLHRDFG QLTVAAGVAD DVAGWLLLSV VSALAATGGA HRFPWQAMLW LVVIVLGAVL IARTLAPRVL RRAGRGSTPG PVVATVVAVF LGCAAATQAA GLEASFGAFV GGLVVGTAAE ADLRWLAPLR TVVASVLAPL FFATAALRVD LGVLRDPVIL GAALVAVAIA AVGKFAGAYL GGMTAKLDRW ESLALGAGMN ARGVIQLIVA SVGLRIGVLN TDSYTIVVLV AVTTSLMAPP ILRLAQGRIG GTPAEEERRV RLAAMR
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