Gene Caci_6336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6336 
Symbol 
ID8337699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7286586 
End bp7286909 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content68% 
IMG OID644959437 
Productbranched-chain amino acid transport 
Protein accessionYP_003117031 
Protein GI256395467 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1687] Predicted branched-chain amino acid permeases (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.451531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00134723 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCCC ACCTCCTGGC CTCGATCGCC GTGATCTCGG CCGTGACGAT CGCCTTGCGA 
GCCACCGGAT TCCTCGTCCT GACCCGCTTC ACCGACACCC CGGTGCTCCG CGTGCTCGGC
ACCCTGATGC CACCCGGCGT CATGGCCGTC CTCGTGGTCT ACAGCATCAG CTCCGTCGAC
TTCTCCCAAG CGTCCCACGC CGCGCCGGTG GTGCTCGGTA TCGGGGCGAC CGCCGCGATC
CACCACTGGA GGCGCAACCC GTTTCTCAGC ATCCTGGCCG GCACGGCTGC CTACGTCGTC
TTGCTCAGGC TGCTGGGTTC GTGA
 
Protein sequence
MNAHLLASIA VISAVTIALR ATGFLVLTRF TDTPVLRVLG TLMPPGVMAV LVVYSISSVD 
FSQASHAAPV VLGIGATAAI HHWRRNPFLS ILAGTAAYVV LLRLLGS