Gene Caci_6328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6328 
Symbol 
ID8337691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7277623 
End bp7278648 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID644959429 
Productoxygenase (secreted protein) 
Protein accessionYP_003117023 
Protein GI256395459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0712718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0105012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC TGACCGCCTC CCGGATCGCC AACCCCGCGA CGCTGGCCGA CATCGTGATC 
CCCGACGCCG CCCGCGATGC GATGGGCACG CAGCTGGCCG CGATGCCCGA ACCCACGGCG
CGGATCGACT GGGCGATGGC CCGCTTCCAC CAGATCTTCG CCACGCTGCC GGTCGAGGTG
CTGCAGCAGA TCCTGGACTT CGGCCGCCAC TCGGACACCC CCGGCGTCGG GTACGTGCGC
AACCTGCCGG TCGATGCCGT CGTGCCGCCG ACCCCCGGCG ACGGCGGGCC GAGCGTCGGC
AAGCCGAGCT ACGTGGCCGA GGGCGTGCTG CTGGGCCTGT CCGGACTGCT GGGCGAGCCG
GTGGGCTTCC TGACGGAAAA GCAGGGTCAG CTGGTGCACG ACGTGGTGCC GGTCCCCGGC
GGCGCGAAGA CGCAGACGAA TCAGGGTTCG ACGGTCTTCC TGAACTTCCA CAACGACATC
GTGCACGACT CCATCGGCCG CTACGACGTC AGCAACCCCG ACTTCCTGGT GCTGAGCTGC
CTGCGCGCCG ACCACGAGGG CATCGCGGCG ACGTACTACG CCGACGCGCG GGACATCGTC
GCGGCGCTGG ACGACCAGGC GCTGGAGATC CTGCGCAGCC CGCTGTTCCG CTTGAACGCG
CCGGGGAGCT ACGTGCGCGA CGTCGCCGGC GGCGGCGAGG TGCTGTCCGA TCCGGTGCCG
ATCCTCAGCG GGCCGCAGGA GTTCCCGGAG ATAGCGGTCT CCGCGAACGG GGTGCGTGCG
ATGACCTCGG GGGCGCAGAC GGTGCTGGAC CGGCTGCAGG CGGCGTGCCG CGAGGTGTCG
CACCAGGTGT TCCTGCGGCC GGGGCAGGCG CTGCTGATCA ACAACCGCAA GGGGCTGCAC
GCTCGGTCGC AGTTCACGGC TCGGTACGAC GGTGAGGACC GCTGGCTGCA GCGGACTTAC
GTGCGGCGGA GCCAGTGGAC CATCCGGTAC CGCGCGACGG AGGGGAACCG CCGGGTGCAT
CACTGA
 
Protein sequence
MTVLTASRIA NPATLADIVI PDAARDAMGT QLAAMPEPTA RIDWAMARFH QIFATLPVEV 
LQQILDFGRH SDTPGVGYVR NLPVDAVVPP TPGDGGPSVG KPSYVAEGVL LGLSGLLGEP
VGFLTEKQGQ LVHDVVPVPG GAKTQTNQGS TVFLNFHNDI VHDSIGRYDV SNPDFLVLSC
LRADHEGIAA TYYADARDIV AALDDQALEI LRSPLFRLNA PGSYVRDVAG GGEVLSDPVP
ILSGPQEFPE IAVSANGVRA MTSGAQTVLD RLQAACREVS HQVFLRPGQA LLINNRKGLH
ARSQFTARYD GEDRWLQRTY VRRSQWTIRY RATEGNRRVH H