Gene Caci_6320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6320 
Symbol 
ID8337683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7268549 
End bp7269889 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID644959421 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_003117015 
Protein GI256395451 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.809424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACCTG TACCGAAGTC AGTGCCGAAG TCAATGACGG CTTCCGGTTC CACCGAGCAG 
ACGCCTCACC TTCGGCTCGC CGGCATCGGC GCGGGCCCGG CCAACCTGGC CCTGGCCGCC
CTGCTGCACG GCGACCGCGG GCAGCCGAAC CTCTTCTTCG ACCGCAAGCC GTCCTTCACC
TGGCACGACG ACCAGCTCAT CACCGGCGCC ACGCTGCAGG TCTCGATCTT CAAGGACCTG
GTCAGCCTGT CCGACCCGAC CAACCGGTTC TCGTTCATGT CCTACCTGCA CGAGCACGGC
CGGATGTACC ACTTCCTGAA CGCGCAGTTC GCCGCGGTAC CGCGCACCGA GTTCCGCAAC
TACCTGGCGT GGGCGGCGCA GACCAACGAG AACGTGGTCT TCTCCGAGAG CGTGCAGCAC
GTGGAGTTCG TCAACGACGT CTTCCGGGTC ACCACCGACC GCCGCCAGGT CACCGCCGAC
AACATCGCGG TGGGCGTCGG GACCGTGCCC TGGGTTCCCG ATCTGGCCGT CCCGCACCTG
GGCACCGGCC ACTTCCACGT CAGCCAGTTC CTGCGGTACG CCGGCCAGCT CGCGGGCAAG
CGCGTCGCGG TGGTCGGCGG CGGCCAGTCC GGCGCCGAGG CGTTCCTGGA CCTGATCTCC
CGCTCCCCGG GCGACCGCCC GGCGTGCGTC TCCTGGGTCT CCCGGCGCCG CAACTACTTC
CCGATCGACG ACTCGACGTT CACCAACGAC TTCTACATGC CGGAGTACTC CGACTACTTC
TACCGGCTCT CCGAGGAGAA GCGCGCCGAG CTGAACTCCG CACACCTGCT CAGCTCCGAC
GGCATCTCCG AGTCGACCCT GCGCGCGATC TACCAAGGGC TGTACCGGCT GCAGTTCGTC
GAGCACGACG AGCACCGCTT CGGACTCCTG CCGAACCGGA CCGTCGTGGC CGCCGACCGC
ACGTCGAACG GCATCTTCGA ACTGATGCTG CGCCACAACG ACGAGTCCGG GCAGAGCCAG
ATCCTCCCGG TGGACGCCGT GGTCTGGGCG ACGGGCTTCC GTCCGGCGCC CAAGACGTTC
CTGGAGCCGC TGCTGAGCCA CATCGAGACC GCGAACGGCG AGGTCCGCGT CGACGAGGAC
TTCGCGGTCA CCTGGGACGG ACCGCCGGAC CGGAACATCT TCATGCAGAA CGCGGTGCGC
GGCCAGCGCG GTCTGCCGGA CGTGAACCTG AGCCTGAACG CCTGGCGCGC CCAGCGGATC
GCCGACCGGC TGCGCGGCAA CAACTCCCCG GAGATGGCGA TGTCGTTCAT CGACTGGTCG
GCCAAGAGCG GGCGGGGCTG A
 
Protein sequence
MGPVPKSVPK SMTASGSTEQ TPHLRLAGIG AGPANLALAA LLHGDRGQPN LFFDRKPSFT 
WHDDQLITGA TLQVSIFKDL VSLSDPTNRF SFMSYLHEHG RMYHFLNAQF AAVPRTEFRN
YLAWAAQTNE NVVFSESVQH VEFVNDVFRV TTDRRQVTAD NIAVGVGTVP WVPDLAVPHL
GTGHFHVSQF LRYAGQLAGK RVAVVGGGQS GAEAFLDLIS RSPGDRPACV SWVSRRRNYF
PIDDSTFTND FYMPEYSDYF YRLSEEKRAE LNSAHLLSSD GISESTLRAI YQGLYRLQFV
EHDEHRFGLL PNRTVVAADR TSNGIFELML RHNDESGQSQ ILPVDAVVWA TGFRPAPKTF
LEPLLSHIET ANGEVRVDED FAVTWDGPPD RNIFMQNAVR GQRGLPDVNL SLNAWRAQRI
ADRLRGNNSP EMAMSFIDWS AKSGRG