Gene Caci_6312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6312 
Symbol 
ID8337675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7260142 
End bp7261089 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID644959413 
Product3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III 
Protein accessionYP_003117007 
Protein GI256395443 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.574995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA ATCAGACCAC TGGTGTCTTC GTGCGCGCGC CGCGATATGT GCTCGGCGAG 
ATCACCAGGA AGCACGACGA GATCGACGGG TTCGCCGAGT TCGTCGACGA AGCCCGGATG
GTGCCCGACG CCGACCTGTG GGGGTGGGGC GAGGTGCACC AGACGGCTTT GACGACCGCC
GAACTCGCGG TGGAAGCCGG GAGTCGAACG CTGGCGGCAG CCGCCGTCGA GCCCGGCGAG
GTCGACGCGC TGGTGCTGTG CTCCACGCGG TTCCCCGCCG AGATCGCTCA GCACGGCGAG
CTGATCGCCA CGGTGCTGCG AGGGCTGGAG CTGGGACCCG TCCCGGTCAC CGGCGTCACG
CTGAACCGCT GCGCGAACCT GCTCGTCGGA CTGCGCGTCG CCGCCGCGAT GGTCGCTGCG
GGACAGCATC GGACCGTGCT GGTGATCACC ACGGACCGGG TCGCCGAGGA ATCGGAGCGG
CTCACCGAGT TCGCGCTGTT CAGCGACGGC GCTGCCAGCT GCCTGGTTAC TCAGCAGGCT
GACACGGCCG GGGATTCGTA CGAGTGGGTC GCCGACGCCG GCGCGCTGGA TCCGGCTGCC
CTGGGACGGG TCACCGAGAT CAGCGCCGAT CTGGCGAAGG TCGCCAACGC GCAGCTGTGC
GCCGAAGCCG GCATCACCCT CGACGCGATC GACGGCTTGC TGCACAACAA CATCTACCTC
CCCATCGTGA CGATGAAGGA GGTGCAGGCG GGCTTCTCGC TGTCCCAGTT GGACACCGCG
AACATCGCCC GGGTCGGGCA CTGCTTCGCT GCGGACCCGC TGATCAACCT GGCCGACCGG
CGCTCGGCCG GGACCATCCG CCCCGACGGG CTGTATCTGC TGGCATCGAG CGTGTCCGGG
TTCCGGGTGT GCGTCCTGCT GCGTGCCGGC GAATCACTTA TCTCGTAA
 
Protein sequence
MNLNQTTGVF VRAPRYVLGE ITRKHDEIDG FAEFVDEARM VPDADLWGWG EVHQTALTTA 
ELAVEAGSRT LAAAAVEPGE VDALVLCSTR FPAEIAQHGE LIATVLRGLE LGPVPVTGVT
LNRCANLLVG LRVAAAMVAA GQHRTVLVIT TDRVAEESER LTEFALFSDG AASCLVTQQA
DTAGDSYEWV ADAGALDPAA LGRVTEISAD LAKVANAQLC AEAGITLDAI DGLLHNNIYL
PIVTMKEVQA GFSLSQLDTA NIARVGHCFA ADPLINLADR RSAGTIRPDG LYLLASSVSG
FRVCVLLRAG ESLIS