Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6301 |
Symbol | |
ID | 8337664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7249556 |
End bp | 7250692 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644959402 |
Product | fatty acid desaturase |
Protein accession | YP_003116996 |
Protein GI | 256395432 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0162476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAA TCGAGCAACT GAATTTCGAT CGGCTGGATC CCGGGGTGAA AAAGGAACTC CGGGAACTGT GCCGTCTCGA CGACTACCAC GGCCCGCTGG CGATCCTCTT CGAGTACGCG CTGATCGCCG CCTCCGTCGC GCTGTGCGTC GCCGGCTCGT ACTGGTTCTA TCCGGTGGCG CTCATCGTGA TCGGCTCCAC GCAGCGCTTC ATGGCGCACT TCCTGCACGA GTCCTCGCAC AAGGTGCTCG CCCGGAACAA GACGCTGAAC CTGATCGGCG GCTCGGTCTT CGCCGGCTAC CTGGTCTGGC ACCTGTACGG GCCCTATCGC AGTTCGCATG TGGGCAACCA CCACCGCAAC CTGGGCGATG CCAAGGACGA TCCCGACTAC AGCTTCCACA TCGAGTGCGG CCTGTACGAC ATCGAACGCT CCGACCGCCA CTTCTTCTAC AAGGACCTGA TCCTGTCGGT CCTGGGTCTG CGCACCGTCG ACTACATCGG CTACGTCGCC CGCGAGCGCA TCTTCTACGA CGGCTCCAAG AACACGGTCT CAGTCCCCAT ATCCCTGCGC ACCGAACGCA TAGTCCTGCT CACCCAGTGG ACCGCCATCA TCGGCCTGTG CGCCTGGTTC GGCTGGCTCC CGCAACTGGC CCTGTTCTGG TTCGTCCCCC TCCTGACCAC CAACGCCGCC ATCGGCTGGC TCGCCGAACT CTCCGAGCAC TACCCGATGC CCGAAAGCGA GAAGCAACCG CTCCTGCTGA CCCGCAACCG CCACGGCCGC TTCCTCGAAT GGTTCCTGAT CAGCCGCCAC AACGACCGCT ACCACCTGGT CCACCACCTG AACACCGGCA TCCCCCACTG GAACCTCGCC CGAGCCCACC GCGTCATGCT CCGCGACCCC GGCTACGCCG CCTGGGACGG CCTCTGGGCC GGCGCCTTCA CCCGCCCCCA CTCCCGCCGC GACAAGGAGA CGGTCATCAG CTACGCCGCC AAATACCGCC AATGGCGCAA AGCCGGCGGC GACCCCGCAG CCGCCAGCCC CACCTTCGCC CGCCTGATGC TCCTCGCCGC CGAAGCCCCC ACCCTCGACC CGACGGCCGC CGCCGAGCAC TGGCGCGAGA CCGCCGACGT CGGGTGA
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Protein sequence | MSAIEQLNFD RLDPGVKKEL RELCRLDDYH GPLAILFEYA LIAASVALCV AGSYWFYPVA LIVIGSTQRF MAHFLHESSH KVLARNKTLN LIGGSVFAGY LVWHLYGPYR SSHVGNHHRN LGDAKDDPDY SFHIECGLYD IERSDRHFFY KDLILSVLGL RTVDYIGYVA RERIFYDGSK NTVSVPISLR TERIVLLTQW TAIIGLCAWF GWLPQLALFW FVPLLTTNAA IGWLAELSEH YPMPESEKQP LLLTRNRHGR FLEWFLISRH NDRYHLVHHL NTGIPHWNLA RAHRVMLRDP GYAAWDGLWA GAFTRPHSRR DKETVISYAA KYRQWRKAGG DPAAASPTFA RLMLLAAEAP TLDPTAAAEH WRETADVG
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