Gene Caci_6301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6301 
Symbol 
ID8337664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7249556 
End bp7250692 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content66% 
IMG OID644959402 
Productfatty acid desaturase 
Protein accessionYP_003116996 
Protein GI256395432 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0162476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA TCGAGCAACT GAATTTCGAT CGGCTGGATC CCGGGGTGAA AAAGGAACTC 
CGGGAACTGT GCCGTCTCGA CGACTACCAC GGCCCGCTGG CGATCCTCTT CGAGTACGCG
CTGATCGCCG CCTCCGTCGC GCTGTGCGTC GCCGGCTCGT ACTGGTTCTA TCCGGTGGCG
CTCATCGTGA TCGGCTCCAC GCAGCGCTTC ATGGCGCACT TCCTGCACGA GTCCTCGCAC
AAGGTGCTCG CCCGGAACAA GACGCTGAAC CTGATCGGCG GCTCGGTCTT CGCCGGCTAC
CTGGTCTGGC ACCTGTACGG GCCCTATCGC AGTTCGCATG TGGGCAACCA CCACCGCAAC
CTGGGCGATG CCAAGGACGA TCCCGACTAC AGCTTCCACA TCGAGTGCGG CCTGTACGAC
ATCGAACGCT CCGACCGCCA CTTCTTCTAC AAGGACCTGA TCCTGTCGGT CCTGGGTCTG
CGCACCGTCG ACTACATCGG CTACGTCGCC CGCGAGCGCA TCTTCTACGA CGGCTCCAAG
AACACGGTCT CAGTCCCCAT ATCCCTGCGC ACCGAACGCA TAGTCCTGCT CACCCAGTGG
ACCGCCATCA TCGGCCTGTG CGCCTGGTTC GGCTGGCTCC CGCAACTGGC CCTGTTCTGG
TTCGTCCCCC TCCTGACCAC CAACGCCGCC ATCGGCTGGC TCGCCGAACT CTCCGAGCAC
TACCCGATGC CCGAAAGCGA GAAGCAACCG CTCCTGCTGA CCCGCAACCG CCACGGCCGC
TTCCTCGAAT GGTTCCTGAT CAGCCGCCAC AACGACCGCT ACCACCTGGT CCACCACCTG
AACACCGGCA TCCCCCACTG GAACCTCGCC CGAGCCCACC GCGTCATGCT CCGCGACCCC
GGCTACGCCG CCTGGGACGG CCTCTGGGCC GGCGCCTTCA CCCGCCCCCA CTCCCGCCGC
GACAAGGAGA CGGTCATCAG CTACGCCGCC AAATACCGCC AATGGCGCAA AGCCGGCGGC
GACCCCGCAG CCGCCAGCCC CACCTTCGCC CGCCTGATGC TCCTCGCCGC CGAAGCCCCC
ACCCTCGACC CGACGGCCGC CGCCGAGCAC TGGCGCGAGA CCGCCGACGT CGGGTGA
 
Protein sequence
MSAIEQLNFD RLDPGVKKEL RELCRLDDYH GPLAILFEYA LIAASVALCV AGSYWFYPVA 
LIVIGSTQRF MAHFLHESSH KVLARNKTLN LIGGSVFAGY LVWHLYGPYR SSHVGNHHRN
LGDAKDDPDY SFHIECGLYD IERSDRHFFY KDLILSVLGL RTVDYIGYVA RERIFYDGSK
NTVSVPISLR TERIVLLTQW TAIIGLCAWF GWLPQLALFW FVPLLTTNAA IGWLAELSEH
YPMPESEKQP LLLTRNRHGR FLEWFLISRH NDRYHLVHHL NTGIPHWNLA RAHRVMLRDP
GYAAWDGLWA GAFTRPHSRR DKETVISYAA KYRQWRKAGG DPAAASPTFA RLMLLAAEAP
TLDPTAAAEH WRETADVG