Gene Caci_6297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6297 
Symbol 
ID8337660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7244453 
End bp7245184 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID644959398 
Producthypothetical protein 
Protein accessionYP_003116992 
Protein GI256395428 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.385351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACAGCGCGAT CTTCAGCGTC ACCCTTGCCG CCGTCAAGGA TCTGGCCGAG 
TCCGGCACCC ACCTGCTCGG CGCTTCGGAG TTCTCCTCGT TGACGAACTC CACGCCGCAG
GACTGGGCGC GCTTCGGCCA GAACTGGGAC GACCTCAAGC TCGACACCTA TATGGCAGAC
GGTGGGACCT ACCGCTACCG GCGGTACGAC CAGTTCGTGG TCGACGTCGA GGCCGAGCGC
ATCATCTTGC TCCAGCACGG TCCATACCGT CAGGAAGCTG ATATCAATAA GCTCAATGGC
GGGATCGACC GGGTCTATGA GCCGCTCACC GCGGCGTTCC TGGACGACCC GCTGTTCCGC
AACATCCTGA TGGAGCTGGC GCTCATCTTC AGCGGCGTCG AGGACGTCAA GAAGTGGAAC
GTCAAGGTGA CGCCCATCCG GATCATCGCC ACGCAGGACC AGGCGGGGCA GCCGACGCCG
GAGGGCCGGC ACAGCGACGG CGCCACCTTC ATCACGTCTT TGATGATCGG CCGCACCAAC
GTGGTCGGCG CGGACAGCTC GGTCTACAGC CCCGACGGCG AGGCGCTGAT CACCACGATG
CTCGCCGAGC CCGGCGAGAT CCTGCTCAGC GACGACCGGC GCACGCTGCA CGACGTCACG
CCGGTGCGCC CGGGCGAGGC CGGGCAGCCG GCCCACCGCG ACGTCCTGAT CATGGCGTAC
ACCGCGCTCT GA
 
Protein sequence
MTTDSAIFSV TLAAVKDLAE SGTHLLGASE FSSLTNSTPQ DWARFGQNWD DLKLDTYMAD 
GGTYRYRRYD QFVVDVEAER IILLQHGPYR QEADINKLNG GIDRVYEPLT AAFLDDPLFR
NILMELALIF SGVEDVKKWN VKVTPIRIIA TQDQAGQPTP EGRHSDGATF ITSLMIGRTN
VVGADSSVYS PDGEALITTM LAEPGEILLS DDRRTLHDVT PVRPGEAGQP AHRDVLIMAY
TAL