| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6287 |
|---|
| Symbol | |
|---|
| ID | 8337650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7232283 |
|---|
| End bp | 7236317 |
|---|
| Gene Length | 4035 bp |
|---|
| Protein Length | 1344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644959388 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_003116982 |
|---|
| Protein GI | 256395418 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGC GGTTCGCCGC GCTGCCCGCG CAGCGCCGCG CGCGGTTCCT GGCACGGCTG
GAAGAGCAGG CGCGGGTCGC CGCCGCGCGC GGACCCGTGC CGCGCCGGGA CGCCGGTCCC
GTGCCGCTGA CCCAGGAACA ACAGACGCTT CGGTCCGCTT CGCAGAGTTC TGCCCCGGGC
ACTCCGCTGT GCCTGCGGCT GCGCGGCGAC CTCGATGTGG ACGCGCTGCG CTTGGCGCTG
GCCGCGCTCG TGGCCCGGCA CGACGCGCTG CGGACGGCGA TCGTGGAACG CGAGGGCGGC
TTCGTCCAGG TGATCGCCGG CGACGTCCCG GTCAGGCTCG CGGTGATCGA GGCTGACGGG
CAGGACCACG AGCGGCGGCT TCTGGACGCG CGCGCCCTGA TCGACCGGGA GGCGGGGACG
CCGTTCGACC TGAGCCGGAC GCCGCCGTGG CGCGCGACGT TGGTCAGGGT CGCCGCGGAC
GACCACTTGT TCGCCTTCGA CGTGTCCCGC ATGGTGTGCG ACACCTGGTC GCACGGCGTC
CTGATCCGCG AACTCGGCGA GTTCTACCGG GCTTCGCGCG ACGGCGAGGC ACCACAGGTC
CCTGATCTTC CCGTGCAGTA TCCGGATTAC GCGCTCTGGC AACGCGATCG GCTCGATGCC
GGCGAGCTGG ACACGCTGGT CGCGCACTGG CGCAGCGCGT TGGCGGGCGC CGAAGTCCTG
GAGTTCCCGA CCGATCGGCC GCGCGGCGAT ACCCAGACTC ATGTCGGCGC GACCGCTGAT
TTCGCGGTCG GTCACCAGGG CTGGGAAAAG GCGTGGAAGC TGGCTCGAGA AGAGGGTGTG
AGCCGGTTCG ACGTGCTCGC CGCCGCGTTC TTCACGGTGC TGCACCGCTA CTCCGGGCTG
ACTGATCTGG TGATCGGCGC GCCGCAGGAG CGGCGGCGGC ACGAGGCGCT GTCCTCGGCG
GTCGGACAGT TCACTGATAT GCGGGTTCTG CGACTGGATG TCTCCGGCGA TCCGACCTTT
CGCGAGTTGG TCCATCGGGT CAAGCGCGCT TCAGACCTCG CGGACGTGGA CGGGGACGGC
GGACTGCCGT TCGGCAAGCT GCTCGACGCC GTTGAGCCGG CTCGCGATCC GTCCCGCTCG
CCGATCTTCC AGATCGTTTT CGACGTGCAG AACGCGGTGA CCACACCTGC CCTGCCCGGC
ATCGACACTT CTCGAGAAGC TGTCCGGCCC GGTACCGCTC GATTCGACAT GAGCTGGCAG
CTGACGGAGC AGACGGCTCC CGGCGCCGAC GCGTCACTGG GCATCGAGTT CAACACCGAA
CTGTTCGACG CCGACAGCAT CGCCAGGTTC GCGCGCCACT ACGACGGCAT GCTCAGTACT
CTGACATCCG CTCCCGACGC TCCCTTGTCC GACGCTGCGA TGCTGAGCCC GGAGGACCAG
GAGTTCCTGG CGGACATCGC CGTCGGACCG GTGCGGACGA TCCGCGAGAC GACGATCGTG
GAGGAGTTCC AGGCGCGCGT CCAGGAAGCT CCCGACGCTG TGGCGGTCGT CGTCGGTGGT
GTCGAGACCA GCTATGCCAA GCTCAACGCC GGCGCGAACC GGCTTGCTGC GTTGCTGCGC
GAGCGCGGTG TCGAGCCGGG CGCCAGGGTC GGCATCTGTC TGCGGCGGAA TGTGGACCTG
ACGACGGCGA TGCTCGCGGT TCTCAAGACC GGCGCCGCTT ATGTGCCGCT CGACACCACG
CATCCTTCCG CTCGAGTCGC CGAGATCGCC GCAGACGCCG GGGTGTGCGC GGTCATCACG
CATGCTGCGG TCGCCGACGT CCTCAGCGAG GTCGAGGCGC CGGTGGTGAC GCTGGACGAG
GTGCGCGCGG AGCTGGCCGT CATGCCCGCG CACGATGTGC CGCTCGCCGC AGAACCCTGC
GACGTCGCCT ACGTCATCTA CACCTCCGGC AGCACCGGCA AGCCGAAGGG CGTGCTGCTG
GAGCACCGCG GCGTGGTCGC CTTCATCGAC TCCGTGCGCG AGCTGTTCGA GCTGACGCCC
GCTGATCGGA TGCTCGGGTT CGCCTCGGTG ACCTTCGACG TCTCCGTCTT CGAGACCTTT
TCCGCGTTGC TGACCGGCGC GCGCCTGTGC ATCGCCACCG AGGACGAGCG GCTGTCCATC
GACCGGCTCC AGGCGCTCAT GGAGCGAGCG GGCATCACGG TCATCGACCT GCCCCCGACC
GTCATGCCGC TGCTGGCGCC GGAGCGGTTC ACCGAGCTGC GGATCGCCTT CGTCGGCGGC
GAGGCGTTCA GCGGCGAGCT GGTGAACCGG TGGAATCCGG GGCGGCGGCT GTTCAACGGC
TACGGGCCGA CCGAGTGCAC GGTGACGATG ATCGTCGAGG AGTGCGCGGG TACGTGGGAC
GCCTCGCCGC CGATCGGGTT GCCCATGGCG AACCACGTCG CGCACGTGCT CGATCGCGAC
CTGCGTCCGG TGCCGATCGG CGTGCCGGGG GAGTTGGTGA TCGGCGGCGC TGGGTTAGCG
CGCGGCTACC TGGATCGCGA CGAGCTGACC GCGGAGAAGT TCATCGCAGA CCCCTTCGGT
ACTGCTCCCG GTGGTCGGCT GTACCGCACC GGGGATCTGG TGAAGCGGCT GGCGGACGGC
CGGTTGGTGT TCCAGGGCCG GATCGACCAG CAGGTCAAGA TCCGCGGTTT GCGGATCGAG
CTGGGCGAGG TGGAGTCGGC GGTGACCGGC TTCGCGGGGA TCGAGCAGGT CAGTGTGCGG
CCGTGGGCTG ACGACGCCGG GGACAAGCAT CTGGTCTGCT ACGCGACCGG TATTGCCGAG
GGGCAGGTGC CGGCGCTGCG CGAGCATCTC AGTACTCTGC TGCCGTCGTA CATGATCCCG
TCGTATTTCG TAGTGCTGGG GGAGATGCCG CTGACCAGCA GCGGCAAAGT CGACTGGCGT
CGCCTGCCCG CGCCCGAGGT GGGGCAGGCC GAGGTCGGTG CGCCGGTCGC CGAGGCGCGG
ACCGCGACCG AGCGGGTGCT GCTGCATGAC GTGCTCGCGC CGCTGCTGCG CACCACCCGG
CTCGGGGTGA ACGACGACTT CTTCCTCGCG GGCGGCAACA GCCTGCAGGC GGTTCAGCTG
ATGTCGGCGA TCAATCGCCG GTTCCGGGTG GAGGTCTCGC TCGGCGACTT CTTCGTCTCG
CCGACCGTCG CGCACCTGGC TGCGACCATC GACCGCGCTC GTGCCGAGCA GAGTGTCGCG
AAGGACGAAG AAGGCAGTCG GGCATCGGTG GTGATGCGGG CCGCCGGTCC GGCGCAGGTA
ATTCTGATGC ATCCGTCGGG CGGCGAGCTT TTCTGCTACA TGCCGTTGGT CAGGGCTCTG
CGTCAGGACA TCGGGGTGGT CGGCTTCGCC GCCGATCCCC AGGACGCCGC TGTGGATCCG
GGCGAGGGCT TGGCGGTGAG CGCCGCGCGG ATCGCTCAGA CGCTGATCGC CGGCGGGTTG
CCGGAGTCGT GCTGCCTGGC CGGCTGGTCC TATGGCGGCG TGCTCGCCTT CGAGGTCGCG
CGGCAGATCG AGGAGCGGAT CGGACGGCGC GTGCCGTTGG TGCTGCTCGA TGCCGCCTAT
GACGAGGACA CCGAGCCGCT GGACGAGGCG ACGGTGCGGC AGCGGTTCGT GCACGACGTC
GCCCGGTTGG CGGGGCGTGA CGGGTTGGCG GTGCGCGCGG TGCTGGAGCG TCCGGACATC
GGCGGGGACG ACATCAGGGA GACGCTGACC GGGCTCGGCG TCCGGCTGGA GCTCACTGAC
GAGGAACTGG ACTCGCGCTT CCAGACCTTC CGGGCCTGCG CGCTGTCGAT GCAGGCGTAC
AGCCCGCCCG GTTCCTACGG CGGACCGGTC ACGGCGCTCG CCGCCTCGCC GCGTGTCGCA
GTGCACGAAC AGTGGCGGTC GGTGTGCACC GGGCGGTTCT GTGCCGAGCG CGTGCCCGGT
GACCACTACA CCCTTTTCAC GAAGCTGGCT TTGAGCCGGG TCGTCGCGGC GATCGAAGAG
ACGCTCGCGC GTTGA
|
|---|
| Protein sequence | MSRRFAALPA QRRARFLARL EEQARVAAAR GPVPRRDAGP VPLTQEQQTL RSASQSSAPG
TPLCLRLRGD LDVDALRLAL AALVARHDAL RTAIVEREGG FVQVIAGDVP VRLAVIEADG
QDHERRLLDA RALIDREAGT PFDLSRTPPW RATLVRVAAD DHLFAFDVSR MVCDTWSHGV
LIRELGEFYR ASRDGEAPQV PDLPVQYPDY ALWQRDRLDA GELDTLVAHW RSALAGAEVL
EFPTDRPRGD TQTHVGATAD FAVGHQGWEK AWKLAREEGV SRFDVLAAAF FTVLHRYSGL
TDLVIGAPQE RRRHEALSSA VGQFTDMRVL RLDVSGDPTF RELVHRVKRA SDLADVDGDG
GLPFGKLLDA VEPARDPSRS PIFQIVFDVQ NAVTTPALPG IDTSREAVRP GTARFDMSWQ
LTEQTAPGAD ASLGIEFNTE LFDADSIARF ARHYDGMLST LTSAPDAPLS DAAMLSPEDQ
EFLADIAVGP VRTIRETTIV EEFQARVQEA PDAVAVVVGG VETSYAKLNA GANRLAALLR
ERGVEPGARV GICLRRNVDL TTAMLAVLKT GAAYVPLDTT HPSARVAEIA ADAGVCAVIT
HAAVADVLSE VEAPVVTLDE VRAELAVMPA HDVPLAAEPC DVAYVIYTSG STGKPKGVLL
EHRGVVAFID SVRELFELTP ADRMLGFASV TFDVSVFETF SALLTGARLC IATEDERLSI
DRLQALMERA GITVIDLPPT VMPLLAPERF TELRIAFVGG EAFSGELVNR WNPGRRLFNG
YGPTECTVTM IVEECAGTWD ASPPIGLPMA NHVAHVLDRD LRPVPIGVPG ELVIGGAGLA
RGYLDRDELT AEKFIADPFG TAPGGRLYRT GDLVKRLADG RLVFQGRIDQ QVKIRGLRIE
LGEVESAVTG FAGIEQVSVR PWADDAGDKH LVCYATGIAE GQVPALREHL STLLPSYMIP
SYFVVLGEMP LTSSGKVDWR RLPAPEVGQA EVGAPVAEAR TATERVLLHD VLAPLLRTTR
LGVNDDFFLA GGNSLQAVQL MSAINRRFRV EVSLGDFFVS PTVAHLAATI DRARAEQSVA
KDEEGSRASV VMRAAGPAQV ILMHPSGGEL FCYMPLVRAL RQDIGVVGFA ADPQDAAVDP
GEGLAVSAAR IAQTLIAGGL PESCCLAGWS YGGVLAFEVA RQIEERIGRR VPLVLLDAAY
DEDTEPLDEA TVRQRFVHDV ARLAGRDGLA VRAVLERPDI GGDDIRETLT GLGVRLELTD
EELDSRFQTF RACALSMQAY SPPGSYGGPV TALAASPRVA VHEQWRSVCT GRFCAERVPG
DHYTLFTKLA LSRVVAAIEE TLAR
|
|---|
| |