Gene Caci_6280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6280 
Symbol 
ID8337643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7223468 
End bp7223857 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content68% 
IMG OID644959381 
Producthypothetical protein 
Protein accessionYP_003116975 
Protein GI256395411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.896361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG TCAAGAAGTT CCAGGTCACC TTCGACTGCG CGCAGCCCGA GCGCGTCGCT 
CTCTTCTGGT GCCAGGTGTT GGGATACGTC GTCCCGTCGC CGCCTGACCC GCAAGGTGCG
TGGGCGGCAT GCGTCGATCC CGCGGGCGTG GGTCCGCGGC TGTTCTTTCA GCGCGTCCCC
GAGGGCAAGA CCGTCAAGAA CCGGCTGCAT CTCGACGTGC GGACCGCCAC GGGACTGGTC
GGCGAGGAGC GCGTGAAGGT CCTCGAAGCC GAATGCGCAC GCCTGATCGC CCTCGGCGCG
ACGCGCGTGC GGCTGCTGCC CGCCGACGGT GAGGACGAGG CCTGCCTGGT CATGCAGGAC
GTCGAGGGCA ACGAGTTCTG TCTGGACTGA
 
Protein sequence
MASVKKFQVT FDCAQPERVA LFWCQVLGYV VPSPPDPQGA WAACVDPAGV GPRLFFQRVP 
EGKTVKNRLH LDVRTATGLV GEERVKVLEA ECARLIALGA TRVRLLPADG EDEACLVMQD
VEGNEFCLD