| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6271 |
|---|
| Symbol | |
|---|
| ID | 8337634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7213759 |
|---|
| End bp | 7215735 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644959372 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003116966 |
|---|
| Protein GI | 256395402 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.449119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACC CGACCGGTCT GGTGCTGGTG GGCTTGGACA TCACGGTCCT GATAGCCCTC
ACCCTGCAGC CGCTCGGCCG GCACTTCGAC GACTCCGACC AGGGGGCGGA CGCCGTGGTC
CGCCTCCCGC CCTTCCGCCG CCCCTCGGTG CCCAGGGTGG TGGTGTTCCT CGCTCTGATC
ACGGCCGCGA ACCTGGTCAT CGTGGCGATG CGGCCCTCGC CGTTCGTCCA GGTGTACCGG
TCGCTGGTCG CGCGCATGGT GGACTCGGTG GTCCACGATC CGGGGTTCAG CACGTATTAC
GCGGCCAAGC TGGTGCCTCT GGTACCGACC ACCGTGCTCG CCTTCATGGT GATCGCGGCG
ATCGTCCTGC CGGCCACGCC GGGCCGGCGC TTGATGATCG CCGCGCACGG TGTGCTGTTC
CTGGCCGTCT CGGTTGTGAC CAGCACGATG CTGGCGCTGG TCGCCTATGC GGTGAACTCC
CCGACTTTCG GTCCGCTTCC GCTGATCGAC CTGGTGTTGC AGGAGTCGGT CGCCTTCTTC
GTCGTCTTTC GCTTCGCGTT CACCAGTTTC CAGTTCCCGA GGGTGACGCA GGTTCCTGCG
ACGAAGCCGG GCCGCCGGTG GGAGACGTTC CTGCTGCTCA TGTGCCTGGT CGCGGCGCTG
TGCATGATGG GCAGCTTGGC GGTCGTGCTG ATCGCGCGGG CCGGCGCCGA GTTGTTCGTC
GCGTTCCTGG TGATCCGCGC GCTGCGAGCC GGGGTCATGG ACTGCATCTA TGTCCTGCTC
GGCTTGGTGC GGATGGCAGG TCCCGGGTCG CCGCGCCCGG ACGAACGGCG GCCGCCGCTG
GAGGTCATCA TTCCGGCGTT CAACGAGGCG GTGGTGATCG AGCGGACGCT GCGGTCGATC
GACCGGGCGG CTCGCGCGTA CGGCGGTCCG GTGCGGGTGA TCCTGTGCGA CGACGGGTCG
ATGGACGACA CGCGCGCGCT CGCCGAAGCC ACCATCGCAG AGTTCGGATA CGCGACCGGG
GAGGTGATCC AGGGGCGGCA CGCCGGTAAG TCGGTCGCGC TCAACCTCGC GCTGGCCGAG
TGCGAGGCGG ACTACGTCTA CCGGATCGAC GCGGACTGCG CGCTGGACGC GAACGCCTTC
GTGTACTCGG TGCCGCACTT CCTGAAGCAT CCAGATGTGG GGCTGGTCGG GGCGTTCGTG
CTGCCCAAGG AGCCCTACAC CACCTGGATC GACCGGATGC GCGCACTGGA GATGATCTTC
AGCTTCGGCT TCGCGCGGGT GATGCTGGCC GAGGTCGACG CCGTGCCGTG CGTGCCGGGC
ACGTTCTGTG CGTTCCGCCG GCTGCCGGCG CTGGCCATCG GCGGGTTCGT GCACGGGACG
CTGGGCGAGG ACGTGTTCTT CACGTGCTCG ATGGCACGGC TGGGCTACCG GGCTGCCATC
GATCCGCGCG TGATCTCCTA CGAGGACGTG CCGACCACGG TCCGCCAGCT GCGGGTGCAG
CGGTTCCGGT GGTGCAAGGG CGGGATCATG AGCTTCGCGG CGTATACGCC GTTCGGCTGC
GGCGCTCCTG GTCCGCGGAA CTGGTTCAAG ATGCCGCTCG GCGCGGGCAA AGGGCTGCTC
AAGCCGTTCA GCTCGGCGAT GTTCCTGCTG ACGATCGAGT TGTCGATCCT GGATCCGACG
GTACGTCACA ACGTTCTGCG ATTCGTTCTG CTGCTGCTGG CGAGTCAGAT CACTTCGATC
GTGCCGCGGC TGATCGTCAT GGGGTACTAC CGGCGGCTGC GGCTGCTGCC GTGGATGGTG
CTCTGGATTC CGTTCTCGTT CCTCAAGAGG TTCTTCATGA TCGAGGCGTT CCTGTCCTTC
GGGATGCGGC CGGTCAAGCC TCCGTTGCGA GTGCGGTCGC GGTTTCCGAC GTGGTCGTCG
GTGTTCCGAG CCCGTCCGGC CTCGGCGCTC GATCCGGCGG GAGGTGCGGC CGAATGA
|
|---|
| Protein sequence | MTHPTGLVLV GLDITVLIAL TLQPLGRHFD DSDQGADAVV RLPPFRRPSV PRVVVFLALI
TAANLVIVAM RPSPFVQVYR SLVARMVDSV VHDPGFSTYY AAKLVPLVPT TVLAFMVIAA
IVLPATPGRR LMIAAHGVLF LAVSVVTSTM LALVAYAVNS PTFGPLPLID LVLQESVAFF
VVFRFAFTSF QFPRVTQVPA TKPGRRWETF LLLMCLVAAL CMMGSLAVVL IARAGAELFV
AFLVIRALRA GVMDCIYVLL GLVRMAGPGS PRPDERRPPL EVIIPAFNEA VVIERTLRSI
DRAARAYGGP VRVILCDDGS MDDTRALAEA TIAEFGYATG EVIQGRHAGK SVALNLALAE
CEADYVYRID ADCALDANAF VYSVPHFLKH PDVGLVGAFV LPKEPYTTWI DRMRALEMIF
SFGFARVMLA EVDAVPCVPG TFCAFRRLPA LAIGGFVHGT LGEDVFFTCS MARLGYRAAI
DPRVISYEDV PTTVRQLRVQ RFRWCKGGIM SFAAYTPFGC GAPGPRNWFK MPLGAGKGLL
KPFSSAMFLL TIELSILDPT VRHNVLRFVL LLLASQITSI VPRLIVMGYY RRLRLLPWMV
LWIPFSFLKR FFMIEAFLSF GMRPVKPPLR VRSRFPTWSS VFRARPASAL DPAGGAAE
|
|---|
| |