| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6264 |
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| Symbol | |
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| ID | 8337627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7203542 |
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| End bp | 7206742 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959365 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003116959 |
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| Protein GI | 256395395 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.616915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.333942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCG GGCCGGTGGA GGCCGTCACC GACGACGGCG ACCCGATCAG TCTCGGCGGA
CCGCGGGTCC GCGCCCTGCT GGCGTTCTTG GCTCTCGAGC CCGGACGCGT GGTCCCCGTC
GACCGGCTGG TCGACGGCCT GTGGGGGCAG GACCTCCCCG GCAACGCCGC GAACGCGCTC
CAGACGCTGG TCAAGCGGCT GCGCACGGCC GTCGGCCAGA CGCGGGTCGT CGCCCGCGCG
ACCGGCTACC TGCTCGACGC CGCCATCGAC GGCGAGGTCG ACGCCGCCGC CGACCAGGTC
GACGCCGCCA CCTTCCTGCG CCTCGCCGAC GAGGGCAGCG CCCTGCTCGC GGCGAGCCCG
CCGAGCCCGG ACCTCGCGGC GAAGAGCCTT GATGAAGCCC TGGCACTGTG GCGCGGACCG
GCCCTCGCCG ACGTGGCGAT GATGCCCTTC GCCGAGCAAG CCATCACCCA GCTCACCGAG
CGCCGCCTGG ACGCCGTCAT GGACCGCGCC CAGGCCTACC TGGACCTCGG CCGTCCGACC
CGCGTCATCG AAGAACTGAC CACCGAACTC GCAGCCGATC CCCTGCGCGA ACGCCTCGCC
GTCCTGCTGA TGCGGGCCCT GCGTGCCGAC GGCCGCCGCT CGGAGGCCCT GGCAGTGTTC
GAGCGAACCC GCCGGGAACT CGCCGACCAA CTCGGCGTCG GACCCTCCGC GTCCCTCGCC
CAAGCCCACC TGGAATCCCT CGACGACGAT CCCCCTCCGC CCCGGGTCGT CGCGGTCACC
AACCTGCAAG CCCGCCTGAC CAGCTTCGTC GGCCGCCAAG CCGAGGTCGA CGGCCTGACC
CGCCGCCTGG CCGAATCCCG CCTGGTGACG GTGGTCGGCG CCGGCGGCGC GGGCAAGACC
CGGCTGGCCG GCGAGACCGC GCTGCACTCC CTTCAGCGCT GGCCCGGCGG CGTGTGGCAG
GTCGAGCTGG CGCCGGTCGG CGACCCCTCC GGCGTGCCGT TCGCGTTCCT GAAGGTGTTC
GCGATCCGTG ACACCGACGG CCCGGACGCC GCCGACCGCC TCGCCGAAGT GCTCTCGCGC
GAACCGACGC TGCTGGTCGT GGACAACTGC GAGCACGTCA TCGACGCCGC CGCCCGCCTC
GTCGAGGATC TGCTGGTCCG CTGCCCGCAC CTGCGCGTGC TGGCCACCAG CCGGGAACCG
CTCGGCATCG AGGGCGAGGC GCTGTGCCCG GTCCCGCCGC TGGCCAGCGC GCCCCGCGAC
GCCGGCGCGG CGCAGGCGCT CCAGTACGCC TCCGTGCGCT TGTTCGCCGA CCGCGCCGCC
TCGGTCCGCC CGGGCTTCGC AGTGGACGAC GACAACGTCG CCGCCGTGGT CGCCATCTGC
TCCCGCCTCG ACGGCGCGCC GCTGGCGATC GAGCTCGCCG CCGCCCGCTC GCGCGCCCTG
ACCCCGCAGA AGATCGCCGA ACGCCTCGAC GACCGCTTCC GCCTGCTCAC CGGCGGCAGC
CGCACCGCCC TGCCGCGTCA CCAGACACTG CGCGCCGTGG TCGACTGGAG CTGGGGACTG
CTCTCGGAGC GCGAACGCCG GCTGCTGTGC CGGCTCTCGG TGTTCTCCGG CGGCGCGAGC
CTGGACGCCG CCGAGGCGAT GTTCGGGGAC GAAGTCCTGG ACGTCCTGCC CGCCCTCGTC
GACAAGTCCC TGCTGGAAGT CGACCGCGCG GACCGCTACC GCATGCTGGA GACGATCCGG
GCGTTCGCCC TGGAACGCCT CGCCGAAGCC GGCGAAACGC AGAGCGCCGC AGCCGAGCAC
GCGCGCTACT TCCTGGACGT CGCCGAGGGC GCCGTCCCGC AGCTGTTCAT GAACGCGCAG
CTGGAAGCGA TCGAGCTGCT CGGCGCCGAG CACGACAACA TGGTGACCGC CCTGCGATGG
GCCATCGACC ATGGCGAAGT GGAGACGGCG CTGCGCCTGT GCGGCGCGCT GATCTGGTTC
TGGTGGCTGC GCGGCCATCG GCTGGAGGCG TACCAGTGGG CCCGGCAGGC AGTCGCGTCC
GCCGCCGGAG GCGTCCCGCA GGGAGCGGCG CGCGCCTACG CCGCGTCGGT GTTCGCGACC
CACATCGCCT ACTTCGTCCA CCCGACCGAC TTCTCCGCGG TCACTGCCGA ACCCGACCGG
CTGGCCGGGA CGGCGCAGGA ATTCGACCAC CTGCTGGCCC TGGCGCGCGC CGAAGGCCCG
GTCCCGCCGA TGCTCGAGGT CTCCGGCGCG ATGCTGACCG CGATGGCCGG CGATCAGGAC
GCCGCCCTGC GATGGCTCGA CCGCTGCGCC GAAGCGCCCG ATCCGTGGCT GGCAGCCGCC
GGTCGCATGA TGCGCGGCAA CCTGCGCATC ATGCTCGCCC GCCCCGATCT CGCCGGTCCC
GACCTCCAAG CGGCGGTCAC CGGGTTCCGC GCGCTGGGGG AGCGGTGGGG ATTGAGTCAG
GCGTTGCTGC TGCGCTTCCG GCACGCCGCG ATCACGCAAG GCATCGCCGC CGCCTCACCG
TTGATCGCCG AGGCCGGTCA GCTCATCGCC GACTGGCTGA GTCCGGAGGA AGCCGTCGCG
ACTCTGATGC GCCTGGCCCA CGAGCGGCTG ATCGCCGAAG ACGTGGACGG CGCGATCCTG
GACACCGCGC GGGCCAAGGA GATCGCCGCC GGTGGCGTAC CGCCGGAGTG GCACGCACAG
ATCCAGCTCG CCGAAGCCGA CATCGCACGC CGCCAGGGCG ACTTCGCCGC AGCCTGGCCC
GCCTACGCCG AAGGCCTCGA GGCGATGGAA CGCGGCCGGC TCACCGTTCC GCAGGACATC
GCGTGGGCGC GCGCCGGTTA CGGACGTGCG CTCACCGCTT CGGGGGATCC GGCAGCCGGC
ATCGTCCAGC ATCGGCTCGC CGTGACCGCG CTCGGCGCGT TGCGGGACAT CCCGATTCTC
ACCGTCGTGG TGCTCGGCGC CGCGGTGACG CTCGAAGCAG CGGGCCGGTC CGAGGAGGCG
GCGGTGCTGT TCGGCGCCGA GGTCGCGCTG ATGGGGCAGG GACTGGTACG CGGTCCCGAA
ATCACTGGCG CGCGCGAGCG TACTGTCGCG GCGCTGGGGG ACGAGGCGTA CCGGCGGGCT
CACGATCGCG GCGCCGCGAT GACGTACGAG GAAGTGGTCG CCGAGATGCG CTCAGTCCTC
GGCGACGACG GGCAGCAGTA G
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| Protein sequence | MILGPVEAVT DDGDPISLGG PRVRALLAFL ALEPGRVVPV DRLVDGLWGQ DLPGNAANAL
QTLVKRLRTA VGQTRVVARA TGYLLDAAID GEVDAAADQV DAATFLRLAD EGSALLAASP
PSPDLAAKSL DEALALWRGP ALADVAMMPF AEQAITQLTE RRLDAVMDRA QAYLDLGRPT
RVIEELTTEL AADPLRERLA VLLMRALRAD GRRSEALAVF ERTRRELADQ LGVGPSASLA
QAHLESLDDD PPPPRVVAVT NLQARLTSFV GRQAEVDGLT RRLAESRLVT VVGAGGAGKT
RLAGETALHS LQRWPGGVWQ VELAPVGDPS GVPFAFLKVF AIRDTDGPDA ADRLAEVLSR
EPTLLVVDNC EHVIDAAARL VEDLLVRCPH LRVLATSREP LGIEGEALCP VPPLASAPRD
AGAAQALQYA SVRLFADRAA SVRPGFAVDD DNVAAVVAIC SRLDGAPLAI ELAAARSRAL
TPQKIAERLD DRFRLLTGGS RTALPRHQTL RAVVDWSWGL LSERERRLLC RLSVFSGGAS
LDAAEAMFGD EVLDVLPALV DKSLLEVDRA DRYRMLETIR AFALERLAEA GETQSAAAEH
ARYFLDVAEG AVPQLFMNAQ LEAIELLGAE HDNMVTALRW AIDHGEVETA LRLCGALIWF
WWLRGHRLEA YQWARQAVAS AAGGVPQGAA RAYAASVFAT HIAYFVHPTD FSAVTAEPDR
LAGTAQEFDH LLALARAEGP VPPMLEVSGA MLTAMAGDQD AALRWLDRCA EAPDPWLAAA
GRMMRGNLRI MLARPDLAGP DLQAAVTGFR ALGERWGLSQ ALLLRFRHAA ITQGIAAASP
LIAEAGQLIA DWLSPEEAVA TLMRLAHERL IAEDVDGAIL DTARAKEIAA GGVPPEWHAQ
IQLAEADIAR RQGDFAAAWP AYAEGLEAME RGRLTVPQDI AWARAGYGRA LTASGDPAAG
IVQHRLAVTA LGALRDIPIL TVVVLGAAVT LEAAGRSEEA AVLFGAEVAL MGQGLVRGPE
ITGARERTVA ALGDEAYRRA HDRGAAMTYE EVVAEMRSVL GDDGQQ
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