Gene Caci_6253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6253 
Symbol 
ID8337616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7192736 
End bp7193917 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID644959354 
ProductATPase, RecF-like protein 
Protein accessionYP_003116948 
Protein GI256395384 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.131288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACCA CGCTGGCCGT CGAGAACTAC CGCTCGCTGC GAAACCTGTG CATTCCTGTC 
GGCCGGCTGA CCGTGGTCAC CGGTGCCAAC GGCAGCGGCA AATCCAGCCT CTACCGGGCC
GTACGCCTGC TCGCCGACGT CTCGCGCAAC GGCGCGGTGG CGGCGCTGGC GCGCGAGGGC
GGGCTGAGCT CCACGCTCTG GGCCGGACCG GAGCAGGGCA CGAAGGCGGG TCGCAGGACG
CAGGGCACGG TGCGCAGCGC GCCGGTCGGG CTGCGCCTGG GCTTCGGCGG CGAGGAATTC
GGCTACGCGA TCGACCTCGG GCTGCCGGTC CCCAGCGGGG ATCCGGAGGC CGCGAAATTC
AACCTGGACC CGGCGATCAA GACCGAGGCG GTCTGGAGCG GCCCGGTGCT GCGTCCGGCG
ACCTCGCTGA TCGAGCGGCA CAACGACAGC GTCAAGATCC GCGGCGCCGA CGGGAAGTGG
GCCGCCAAGC CGTATCCGAT CCAGCAGTTC GACAGCATGC TCAGCGAGTT CGCCGACCCC
GAGGCCGCCC CGGAACTGTT CCGCATCCGC GACCGGATCC GCTCATGGCG CTTCTACGAC
CACTTCCGCA CCGACTTCGA CGCCCCGGCG CGCGCCCCGC AGATCGGCAC GCGCACCCCG
GTCCTGGCGC ACGACGGCGC CGATCTGGCC GCCGCGCTCC AGACCATCGT GGCCACCGGA
CGCCGCGCGG AGCTCGACGA GGCGATCGAC AGCGCCTTCC CCGGCAGCCG CCTGGAGATC
CAGGTCGGGC CGGACAGCCG CTTCTCCCTC CATCTGTGGC AGCACGGTCT GCTGCGTCCG
CTCGGCGCCG CCGAACTCTC CGACGGCACG CTGCGCTACC TGCTGCTGGC CGCCGCGCTG
CTGACCCCGC GCCCGGCCGA CCTGATGGTC TTCAACGAGC CGGAGACCAG CTTGCACCCG
GACCTGCTGC GGCCGCTGGG CGCGCTCGTC GCGGCGGTGT CGGAGCGCAG CCAGATCATC
GTGGTCTCGC ACTCCGCCGG GCTGATCGAG GCCATCGGAC GCGCGGCGGC GAAGCTGCGG
CGCGATGTCG GGATGGTCGA GTTGGAGAAG GTGAACGGCG AGACCGTGCT GCCCGGGCAG
GGGTTGCTCG ACGCGCCGTT GTGGTTCTGG CCGAAGCGGT GA
 
Protein sequence
MITTLAVENY RSLRNLCIPV GRLTVVTGAN GSGKSSLYRA VRLLADVSRN GAVAALAREG 
GLSSTLWAGP EQGTKAGRRT QGTVRSAPVG LRLGFGGEEF GYAIDLGLPV PSGDPEAAKF
NLDPAIKTEA VWSGPVLRPA TSLIERHNDS VKIRGADGKW AAKPYPIQQF DSMLSEFADP
EAAPELFRIR DRIRSWRFYD HFRTDFDAPA RAPQIGTRTP VLAHDGADLA AALQTIVATG
RRAELDEAID SAFPGSRLEI QVGPDSRFSL HLWQHGLLRP LGAAELSDGT LRYLLLAAAL
LTPRPADLMV FNEPETSLHP DLLRPLGALV AAVSERSQII VVSHSAGLIE AIGRAAAKLR
RDVGMVELEK VNGETVLPGQ GLLDAPLWFW PKR