| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6252 |
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| Symbol | |
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| ID | 8337615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7190368 |
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| End bp | 7192581 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959353 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003116947 |
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| Protein GI | 256395383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.189274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG CACCACTGGT ACGTCCCGGT CCACGCCGCG TCTTCGCCGT CTTCTTGGCG
GCGCTGCTCG CCCTGTTCTG TGCCAACGGC AGCCAGCCGA AGGCGTACGC GCAGAGCAAC
GGCGCGGCGC TCACGCCGCT CATGGGCTGG AGCAGCTGGT CCTTCCTGCG CAGCGCGCCG
ACCGAGGCGA AGATGAAGGC CCAAGCCCAA TCCATGTCCA GCTCCGGGCT GGTCGCCGCG
GGCTACAAGT ACGTCAACCT CGACGACTTC TACTACCTGA ACCCCGGGAC CACCGTCGAC
TCCTACGGCC GCTGGGTCAT CGACACCGGC AAGTTCCCCG ACGGCATGGC GAATCTGGGC
TCGTACATCC ACTCCCTCGG TGAGAAGTTC GGGATGTACC TGACCCCGGG CATCCCGGTC
GCGGCGTACA AGCAGAACAC GCCGATCCAG GGGACCTCGT TCCACGCCCA GGACATCGTG
TCCAACACCA GCAGCTACGC GACGAACTAC AACTTCGGCA ACGGCGCGAT GTACAACATC
GACTACGCCA AGAACCCCGC CGCCGCGCAG GCGTTCCTGA ACTCCTGGGC CAACGAGCTC
GCCGGCTACG GCATCGACTA CCTGAAGGTC GACGGCATCA GCCCGAACGA CGGCGACGCC
CAGGGCGTGG CCGACACCCA GCACTGGTCC CAGGCGCTCA ACCAGACCGG CCGCACCATC
CACCTGGAGC TGTCCAACTC GCTGACGCCC GCGGACGCCG CCTCCTGGCA GCAGTACTCC
AACGGCTGGC GCATCGACGG GGACGTCGAG TGCTACTGCG GCTCGAACTC CTCCTTCCCG
CTGACCGACT GGAACAACGT CAGCCAGCGT TTCACCGACG TGCAGCCGTG GATCGGCGTC
GGCGGCACCG GCGGCTGGAA CGACCTGGAC TCGGTGGAGA TCGGCAACGG CTCCAACGAC
GGGCTCACCC TCGACGAGCG GAAGACGCAG CTGACGCTGT GGGCGATCGA GAACTCCAAC
CTCACCCTCG GCGTCGACAT GACGCACCTG GACTCCACCG ACGTCGGGCT GCTGACCAAC
AGCGAAGTGC TCGCCGTGGA CCAGGCCGGA CACCCGGCGC GCGCGGTCGA CCGCACGACG
CCGCTGCAGA CCTGGTACGC CGCGAACGGC GACGGCAGCT ACACCGTGGC TCTGTTCAAC
CTGTCGGGCT CGGCTGCCAC GGTCACGGCG AACTGGAAGG ACATCGGGTT CACCGGCTCC
TCGGCGACGG TGCACGACGA CTGGTCGCAC AGCAACCTGG GCACGTTCGC GACGAGCTAC
GGCGTTTCAC TGCCTGCGCA CGGCACGACG CTGCTCAAGG TGGTCCCGAC CGGCGCGGCG
AGCTACAACG CGATTTCCTA CAACATAGTC AACGCGAACA GCAGCATGAA CCTGGCCACC
TCGGGCTCCT CGATCGTGCA GCAGAGCCCT GACAACGCCC TCGACCAGGA GTGGCAGCTG
GTCCCGGTCG GCGACGGCAG CTACAAGGTC CTCAACCGCA CCAGCCACCA GCAGCTGGCC
GTTCCCTCAA CCACTCAGGG TGCACAGCTC ACGCAGAAGG CCAACGACAA CGCCGCCGAC
TCGCAATGGC GCTTCGTCCC GACCGGCAGC GGCTCGTACA CGCTGAAGTC CTCCTCCGAC
GGACAGGTCG CCGACGTGTC CGGCGCCTCG ACGAGCGCCG GGGCGTCGGT GATCCAGTGG
CCCGCCAACA ACGGCGCGAA CCAGAAGTGG ACGCTGGTCC CGGTCCCGGA CGCGAACCAG
GGCTACCGGG TCGAGAACCT GCTGACCGGC GGCCGGCTGG ACGTGAACGG CGACTCCACC
GCCGACAGCG CGACACTGGT GCAGTGGTCT GACAACGGCC AGGCCGACCA GCGCTGGACC
TTCGCCAAGC AGAGCGGCGG CGCGTACACG ATCGTCAACG CCAACAGCGG CAAGCTGGTC
AACATCCCGG GCCCGACCAC CGCGACGGCG ACGCAGCTGA TCCAGTTCTC CGACGACGGG
AACAGCAACT CCCGCTGGAC GCTGGTCGAC GAAGGACCGG GCGTCGTCGG GCTGAGGAGC
GTCTACGACG GACAGATGAT CGACGTCTCC AACGGCAGCA CCAACACCGG TACGGCGGTG
ATTCAGTTCA CTGCGAACGG CGGGCAGAAC CAGGACTGGA CACTGGTGCC GTGA
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| Protein sequence | MHTAPLVRPG PRRVFAVFLA ALLALFCANG SQPKAYAQSN GAALTPLMGW SSWSFLRSAP
TEAKMKAQAQ SMSSSGLVAA GYKYVNLDDF YYLNPGTTVD SYGRWVIDTG KFPDGMANLG
SYIHSLGEKF GMYLTPGIPV AAYKQNTPIQ GTSFHAQDIV SNTSSYATNY NFGNGAMYNI
DYAKNPAAAQ AFLNSWANEL AGYGIDYLKV DGISPNDGDA QGVADTQHWS QALNQTGRTI
HLELSNSLTP ADAASWQQYS NGWRIDGDVE CYCGSNSSFP LTDWNNVSQR FTDVQPWIGV
GGTGGWNDLD SVEIGNGSND GLTLDERKTQ LTLWAIENSN LTLGVDMTHL DSTDVGLLTN
SEVLAVDQAG HPARAVDRTT PLQTWYAANG DGSYTVALFN LSGSAATVTA NWKDIGFTGS
SATVHDDWSH SNLGTFATSY GVSLPAHGTT LLKVVPTGAA SYNAISYNIV NANSSMNLAT
SGSSIVQQSP DNALDQEWQL VPVGDGSYKV LNRTSHQQLA VPSTTQGAQL TQKANDNAAD
SQWRFVPTGS GSYTLKSSSD GQVADVSGAS TSAGASVIQW PANNGANQKW TLVPVPDANQ
GYRVENLLTG GRLDVNGDST ADSATLVQWS DNGQADQRWT FAKQSGGAYT IVNANSGKLV
NIPGPTTATA TQLIQFSDDG NSNSRWTLVD EGPGVVGLRS VYDGQMIDVS NGSTNTGTAV
IQFTANGGQN QDWTLVP
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