Gene Caci_6251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6251 
Symbol 
ID8337614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7189630 
End bp7190331 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID644959352 
ProductMOSC domain containing protein 
Protein accessionYP_003116946 
Protein GI256395382 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.364333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.131737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCA AGGAGCTGTG GCGCTACCCG GTGAAGTCGA TGCAGGGCGA GCGCCTGGAA 
TCGGCCGACG TCACCTCGAA CGGCGTGGCC GGCGACCGGC TGCTCCACGT CCGCGATCCG
CGCGGCGTGC TCACCGGTCG GACCCGGCAC GCCCTGCTCG GTGTGCCGGC GGCGACCGGC
GCGGACGGCG AGGTGCGCGT GGCCGGTCGG CCGTGGAACG CCCCGCAGAC CGCCGAGCTG
GTCCGGGCAG CGGCCGGTCC AGGCGCCGAA CTGGTCCGCT ATGCGGGCCC GGAGCGTTTC
GACGTCCTCA ACCTGCTGGT CGCCACCGAC GGCGCCGTCG CAGAGCTCGG ATACGATCGG
CGCCGGCTGC GGCCGAACAT CGTCATCGGC GGCGTTCCCG GTCTGGCCGA GCGCGGGTGG
CCGGGGCACG CGCTGCGGAT CGGCGAGGTG CTGATCGGCA TGCTCAAGCT GCGCGCGCGG
TGCATCGTCA CCACGATCGA CCCGGACACC GGCGAGCAGG ACCTGGACGT GCTGCGCACG
ATCCGCCACG GCTACGAGGG AACGTTCGCC CTGGACTCCT GGACGGCGGC GCCGGGGACG
ATCCGCGTCG GCGACGAGGT GGAGCTGGTG GATCTGGATC CCGGCCGGGC GCGTCCCCGG
CCGGGAGGGT GGATCGTCGG CGCGCCCTAT CTGGTGGCGT GA
 
Protein sequence
MYVKELWRYP VKSMQGERLE SADVTSNGVA GDRLLHVRDP RGVLTGRTRH ALLGVPAATG 
ADGEVRVAGR PWNAPQTAEL VRAAAGPGAE LVRYAGPERF DVLNLLVATD GAVAELGYDR
RRLRPNIVIG GVPGLAERGW PGHALRIGEV LIGMLKLRAR CIVTTIDPDT GEQDLDVLRT
IRHGYEGTFA LDSWTAAPGT IRVGDEVELV DLDPGRARPR PGGWIVGAPY LVA