| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6246 |
|---|
| Symbol | |
|---|
| ID | 8337609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7183715 |
|---|
| End bp | 7184869 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644959347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116941 |
|---|
| Protein GI | 256395377 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0243326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.363078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACT ATGAACGGGC GCAGGCCGCT GCCACGCGCG CGTCGATAGC GGAGCAGAAG
GCTGCGGAGC GGGAAGCCGC GCGCTTGCTC GCTGAGGCGC GTCTTGCCGA AGTGGAAGAG
CTGAACGCAA ACCTGGCGGC TCAATACTCG GACATCGACG GCATTCTGGC TTCAACGCTC
GAAGTGGACG ACTACGTCGA CTTGGCCACA TTGAAGATAA CGACGGTCGA CCATCCGCCC
TTCGAGCCCG GCGTGCTGGC GGTCGAGACC CAGGCGGTAC CCACTCCCCA GCGGTGGTAT
CCGCCGGTGT GGAACGAGCC GATGCCGCCG GCCGGCATGG GCGCCGCGTT CGGCGGGAGG
AAGCGCTACG AGAAGACCGT TGCTGAGGCC AGAGCTGCCT TCGAGGCGAC GTACGCTGAA
TGGTGGCGTG CCGACCAAGC GTTGCAAGCC GCTTATCAGG GGGAACTCGC GCACCGCGAT
GAACTGGAGC AGGCGCGCAA GCGCAAGCTC GCGGAGGCGG AAGCGAAATA CCGGGATGAG
TGCGAGGCTC GGAATGCGCA AGCCGCCGCC CGCAACGCGG AACTCGACAC ACTGATCAAC
GGTCTGGCAT TCGACGTGGA GTCAGCCATC GACGAATACG TCGGAATCGT GCTCGCCAAC
TCGGTATACC CCGAGATATT CCCGGTCGAG CACGACCACG CGTTCGCGCT GCACGGCCGT
GAGCTGACTT TGACCGTGAC GGTACCGGAA CCGTCGAAGA TGCCGACGGT CAAAGAGTAC
AAGTACATCA AGGCACACAA TGAGATCGCA GCCACCCTGT TGTCGGCCCG CGAGCAGAAA
AGCCGATTCG CCGATGCCGT GTACCAGGTG GCCGTCCGCA CGCTGCACGA GGTCTTCGAA
GCAGATCGGG CAGGCAAGAT ACATTCGATC TCCCTGACGG TCGGCGTGGA GACCATCGAC
CCCGGCACAG GTCTTCTCGG CACGATCCCG CTCGTGGTGG TGGCCGCCGA GCGTGAGGCG
TTCACGAAGT TCGACCTGTC CAACGTCGTG CCGAAGGCGA CACTCGAGCA CCTCGGCGCG
GCACTGTCGA AGTCTCCGTT CGACCTGACG CCCGCCGACA CGGCGCCCGG CGTCCGGGCG
ATACGGAGCG CCTGA
|
|---|
| Protein sequence | MRNYERAQAA ATRASIAEQK AAEREAARLL AEARLAEVEE LNANLAAQYS DIDGILASTL
EVDDYVDLAT LKITTVDHPP FEPGVLAVET QAVPTPQRWY PPVWNEPMPP AGMGAAFGGR
KRYEKTVAEA RAAFEATYAE WWRADQALQA AYQGELAHRD ELEQARKRKL AEAEAKYRDE
CEARNAQAAA RNAELDTLIN GLAFDVESAI DEYVGIVLAN SVYPEIFPVE HDHAFALHGR
ELTLTVTVPE PSKMPTVKEY KYIKAHNEIA ATLLSAREQK SRFADAVYQV AVRTLHEVFE
ADRAGKIHSI SLTVGVETID PGTGLLGTIP LVVVAAEREA FTKFDLSNVV PKATLEHLGA
ALSKSPFDLT PADTAPGVRA IRSA
|
|---|
| |