Gene Caci_6244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6244 
Symbol 
ID8337607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7181834 
End bp7182364 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID644959345 
ProductCoA-binding domain protein 
Protein accessionYP_003116939 
Protein GI256395375 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0237327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.436836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCT TGGGCGAGGT GAGCGGCGTG GGCGACGTGG GCGGCGTGAG CGACGGCGTG 
GCGCGGTATC AGGACCCGAC GACCATCCAG CGCGTACTCA ACACCGCCAG GACGATCGCG
GTGGTCGGGC TGTCGAAGAA CGAGCTGCGG GCAAGCTACT TCGTCGGCTA CTACCTCAAG
CGGCACGGCT TTCGGGTCGT GCCAGTGAAC CCGCGCGAGA CCGAGATCCT CGGCGAACGC
TGCTACCCGA GCCTGCGCGA CATCCCAGAG CCGGTAGACG TCGTGGACGT GTTCCGAGCG
TCGGACGCCG TGCCAGGCGT CGCGCGGGAG GCGGTGGAGA TCGGAGCGTC CGCGTTGTGG
TGCCAGTTCG GCGTAATCAA TCCCGAGGGG AATCAGATCG CTGAGAACGG CGGCCTGAGT
GTGGTCGTGG ACCGCTGCAT CAAGATCGAG CACGCGCGGT ACGTGGGGCG GATGCACTGG
CTCGGGTTCA ACACGCATCG GATCACGTCG GTGCGGACCG GTTTGCAGTA A
 
Protein sequence
MSGLGEVSGV GDVGGVSDGV ARYQDPTTIQ RVLNTARTIA VVGLSKNELR ASYFVGYYLK 
RHGFRVVPVN PRETEILGER CYPSLRDIPE PVDVVDVFRA SDAVPGVARE AVEIGASALW
CQFGVINPEG NQIAENGGLS VVVDRCIKIE HARYVGRMHW LGFNTHRITS VRTGLQ