Gene Caci_6230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6230 
Symbol 
ID8337593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7168835 
End bp7169275 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content68% 
IMG OID644959331 
Producthypothetical protein 
Protein accessionYP_003116925 
Protein GI256395361 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.587556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CACCTGACAC ACCTGACACC GTTTCGCCCG CCGCGGGGAC CGACGAGCAG 
CAGATCCGCC GGCTGATCGA GAGCTGGGCC GCTGCCGTGC GCCGCGGCGA TCTGGACGCG
GTCGTCGCCG ACCACGACGC GGACATCGTC ATGTTCGATG TGCCGCCTCC CTACCAGGGC
ATCCGCGGCA TGGACGCCTA CCGCGAATCC TGGCCGCCGT TCTTCGAATA CCTGGCGAAG
GGTGCCTCGT TCGACTTCGT GGAGTTGAAC GTGGTCGCCG GTGCGGACGT CGCGTTCGTC
TACGCGCTGC TGCTCTGCGA CACCCCGGAG GGCACCGCCG CCAACCCGGA CAACCGGCTG
CGGCTCACTG TCGGCTTGCG GAAGCGGGAC GGTCGCTGGA TCGTCACGCA CGAACACCAC
TCGTTCCCCT CGCTGCCGTA A
 
Protein sequence
MTDTPDTPDT VSPAAGTDEQ QIRRLIESWA AAVRRGDLDA VVADHDADIV MFDVPPPYQG 
IRGMDAYRES WPPFFEYLAK GASFDFVELN VVAGADVAFV YALLLCDTPE GTAANPDNRL
RLTVGLRKRD GRWIVTHEHH SFPSLP