Gene Caci_6229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6229 
Symbol 
ID8337592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7167769 
End bp7168872 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content73% 
IMG OID644959330 
Producthypothetical protein 
Protein accessionYP_003116924 
Protein GI256395360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.540475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.839871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCACC TCACCCGTCC GACCGGGGTG GCCCTGGCCG CCATCGGCAT CCAGGCCTTG 
ATGGTGTTCG CCTTCACCGC GCCGACCGTC CACAACGCGC CGCACCGGGT CCCGCTGGCC
GTGAGCGCCC CGGCTCCGGC GCGCGGGGCG GTCGAGCTGC GGCTGGAGCA GGCCGCCCCG
GGCGCGTTCG CCGTGCACGA GGTCGCGGAC GAGGGCGCGG CGCGCGCCGC GCTCGCCGAT
CGGGAGGCGT ACGGCGCCGT CGTCGTGACG ACTCAGGGCC CGCACATGCT CGTCGCCTCT
GCCGCGAGCC CGACGGTCGC GACGCTGTTG ACTCAGGTCG GTTCGCATCT GGCAGCGACT
GGTTCCGACA GCTCAGCGCA GGTGACGGAC GTGGTCCCGG CGTCGGCGGC GGACCCGCAC
GGCGCGGCGT TCACCTCGAT GGTCCTGCCG TTGGTCATGT CCGCGCTGAT CGGCGGGGTT
CTGTTGACGA TCAAGCTGCC GCGCCTGCGC GAGCGGGTCC TCGCCACCTT GTTGTTCGCG
CTCGGCGGCG GTACGGCCGT GACGCTGATC GCCAGCCACG CGCTGGGGTT CCTGCCTGGT
TCGTTCCTTC CGGTCGCCGC CTCGATCGCC GTGCCGATCC TCGCCATCAG CGCCTTCAGC
ATCGCGACCG CGTCGCTCAT CGGACGCTAC GGTTTCGCCC TCGCCGGCGC GATCATGATG
CTGCTCTCCA ATCCGCTGTC GGCGGCGTCG AGCGCGCCGC AACTCCTCCC GACGCCGTGG
GGACGGATCG GCCAGGACCT CCCCGCCGGC GCCGCCGCGA CGCTGATCCG CTCGACGGCG
TTCTTCCATG GACACGGCGC CGGGCACGCC GAGGTCGTGC TCGGCGTGTG GGTCGCAGCC
GCGGCCGCGA TGATGGCCGC CGCGGGTGTG CGGGGCTGGC TGCGGACGAG GACTCATGCG
GATCATGGCA CGCACGCGGG ACATGGCACG CACACAAGCC ACGGCGCTCA TGCCGCTCAT
GCCGCGCACC CGGGGCGGGG CGCGGAGGTC GCCGAGGTCG TATCCCTTAC GGCAGCGAGG
GGAACGAGTG GTGTTCGTGC GTGA
 
Protein sequence
MRHLTRPTGV ALAAIGIQAL MVFAFTAPTV HNAPHRVPLA VSAPAPARGA VELRLEQAAP 
GAFAVHEVAD EGAARAALAD REAYGAVVVT TQGPHMLVAS AASPTVATLL TQVGSHLAAT
GSDSSAQVTD VVPASAADPH GAAFTSMVLP LVMSALIGGV LLTIKLPRLR ERVLATLLFA
LGGGTAVTLI ASHALGFLPG SFLPVAASIA VPILAISAFS IATASLIGRY GFALAGAIMM
LLSNPLSAAS SAPQLLPTPW GRIGQDLPAG AAATLIRSTA FFHGHGAGHA EVVLGVWVAA
AAAMMAAAGV RGWLRTRTHA DHGTHAGHGT HTSHGAHAAH AAHPGRGAEV AEVVSLTAAR
GTSGVRA