| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6220 |
|---|
| Symbol | |
|---|
| ID | 8337583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7160129 |
|---|
| End bp | 7161280 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644959321 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_003116915 |
|---|
| Protein GI | 256395351 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAC CGCAGACGAT CGCCGTTCTC GGCTTGGGAC ACCTCGGATC CGCGATCGCG
AACCGACTCG GCGATCAGGG ACAGAGCGTC GTCGGCTGGA CGCGTTCCGG CGGTACGGAC
GCGAACGAGG CGGTGGAGAA GGCTGACGTC GTCCTGCTGT GCCTGTTCGA CGGGACGGCG
TGCCGCGAGG TGCTCGACCA TGTTCGCGAC TCGCTGAAGG CGGACGCGAT CGTGCTCAAC
ACCAGCACGA TCGCGCCTGG CGAGGCGGCT GAGTTCGCGC GGCGGTTCGG GCCGCGCTAC
GTGCACGTAC CGGTGCTGGG GTCGGTGCGT GCCGTGGCGG CTGGGGCTTT GAAGCTGCTC
GCCGCCGGTG ACGCAGAGTC CTTCGACAGG GTCCAGCCGA TCCTCGAAGC GCTCGGGACC
GTGCTGCGGA TCGAGGACGC GGCCAAGGCT GCGGCGCTGA AGTTGGTGGC GAACTCGAGT
CTTGCCGGTG CTGCCCTCGC GGTGCGCGAC GCGTTGCAGC AGGCTGAGGC GCTCGGGTTG
TCCCGGGACG AGGCTTTGGA CGTGCTCGAA CTCGGTCAGC TTGGCGGGCT TGTCGCGCGC
AAGCGGGACT TCCTGACCCA ACCACCGACC GCGTCTTCTG TCGCCGAGGC GGAGTTCACG
ATCGGGGCGC TGGCGAAGGA CATGGCGCTG CTGGCTGACG CCTCGTCGAA GCCGGTGTCG
AGCGCTGCCG AACTGGCTGA CGCGGCTGAT GCGGCTGGTG TCCCCGAGGC TGACATCGCG
GTCGCGATGA CGACACCGGC TGTGGACGAT GCCGTGCTCG AGCCGTTGCG CGCCTACATT
CGAGGACACG CGACCGGCGA CCCCGCGCAC TTCCGCGAGG CGTTTCTCGC CAGCGCGCAT
GTCGAGGGAA TCCGGGGCGG GGCTTTCGTT TCCTGGCCGT TGGAGGAGTA CTGCGCGCTC
TTTCGCGGGC AGCCCGCGGC TGACGAGGCG AGCCGGACGC GGCGCATCGA CAGCGTTCGG
GTCCACGGGA ACGTCGCGTC CGCCAGCATG ACGCTGCACC ACGGTGCGGA CACCTTCACC
GACATCTTCT TGTTGGTGGA CGGCGAGGGT GGGTGGCGGA TCGCGAACAA GGCGTATTAC
CGGCACGCCT AA
|
|---|
| Protein sequence | MKTPQTIAVL GLGHLGSAIA NRLGDQGQSV VGWTRSGGTD ANEAVEKADV VLLCLFDGTA
CREVLDHVRD SLKADAIVLN TSTIAPGEAA EFARRFGPRY VHVPVLGSVR AVAAGALKLL
AAGDAESFDR VQPILEALGT VLRIEDAAKA AALKLVANSS LAGAALAVRD ALQQAEALGL
SRDEALDVLE LGQLGGLVAR KRDFLTQPPT ASSVAEAEFT IGALAKDMAL LADASSKPVS
SAAELADAAD AAGVPEADIA VAMTTPAVDD AVLEPLRAYI RGHATGDPAH FREAFLASAH
VEGIRGGAFV SWPLEEYCAL FRGQPAADEA SRTRRIDSVR VHGNVASASM TLHHGADTFT
DIFLLVDGEG GWRIANKAYY RHA
|
|---|
| |