Gene Caci_6213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6213 
Symbol 
ID8337576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7153040 
End bp7153846 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID644959314 
Productprotein of unknown function DUF574 
Protein accessionYP_003116908 
Protein GI256395344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.168159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ATGCGCAGGA CCGGCCGGCG TCGCAGATCG ACAGCAGCGT TCCGCACTCG 
GCCCGGATCT TCAATTACTG GCTCGGCGGC AAGGACAACT ACCCTGCCGA CCGTGCGGCC
GGCGACCACT TCCGTGAGGT TTTCCCCGAG ATCGTCGATC TGGCGCGCAG CGGGCGGCAG
TTCCTCGTCC GCACCGTGCG CCACCTGACG GTCGAGACCG GGGTGCGCCA GTTCCTGGAC
GTCGGGACCG GCCTGCCCAC GGCCAACAAC ACCCACGAGA TCGCGCAGGG CATCGCCCCG
GAATCGCGCA TCGTGTACGT CGACAACGAT CCGCTGGTCC TGGCGCACGC GCAGGCGCTG
CTGGTCGGGA CGCCCGAGGG CGCGACCGAC TACATCGAGG CCGACCTCGC CGACCCCGAG
GAGATCCTGA GCCAGGCGGC CAAGACCCTG GACCTGAGCG AACCGGTCGC GATCGTGCTG
ATGGGCATCC TGGCGCACAT CGAGGACTAC GACCGCGCGC TGGCGATCGT CCGCCGGCTG
ATGGACGCCG TCCCGTCCGG CAGCTACCTC GTCATCCGCG ACGGCACCGA CACCAACGAC
GCCTACCGGG AAGCCATCGG CCGCTACAAC CAGAGCGGCG CGGTTCCCTA CAACCTGCGC
AGCCCGGAGC AGATCGCCGG CTACCTCGAG GGTCTGGACC TCGTGGACCC GGGACTGGTG
CCCTGCCCGC TGTGGCGGCC GGACCCGACC GACATCGGGA CCCCGGTGGA GCTGGCGGTG
TTGGGCGCCA TCGGTCGGAA GCCCTGA
 
Protein sequence
MTNDAQDRPA SQIDSSVPHS ARIFNYWLGG KDNYPADRAA GDHFREVFPE IVDLARSGRQ 
FLVRTVRHLT VETGVRQFLD VGTGLPTANN THEIAQGIAP ESRIVYVDND PLVLAHAQAL
LVGTPEGATD YIEADLADPE EILSQAAKTL DLSEPVAIVL MGILAHIEDY DRALAIVRRL
MDAVPSGSYL VIRDGTDTND AYREAIGRYN QSGAVPYNLR SPEQIAGYLE GLDLVDPGLV
PCPLWRPDPT DIGTPVELAV LGAIGRKP