| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6207 |
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| Symbol | |
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| ID | 8337570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7144008 |
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| End bp | 7147361 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959308 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003116902 |
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| Protein GI | 256395338 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.238259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCAC CGTCGCTGCT GTCGGGCTGG CCGGGGCGCG AACGGCGCCT GCTCGGCATC
CTGGCCGCCG TGCTCGTGGT GATCCTGGCT GTGTTCTTCT CCTCCTCCGA CACGCTGCGC
ACCACGGCAT GGTTCGCGCT GTCCGTGTGG ACCACCGCGG CGATGGTCGT GGGCATCCGC
GCCAACCGCC CGCCCTACCC GCTCGCCTGG TACCTGCTGG CGATCTCCGC CGGGCTGCTG
ACGGCATCCA ACCACACCGA CTTCGCCTAC GCCCGGCACA CCCTGCCGAA CTTCGCCGAC
TGGCTCGGAC TGCTCGGCTA TCCTCTGGCG CTGGTCGGGC TGCGGCTGAT CATGAAGCAC
CGGCTGGTCG GCCGGGACTC CTCGGCGACG CTGGACGCGC TGATCGTGGT GTTCGCCGGC
GCCTACGCGG CGTGGGTCTA CCTGGTCGTG CCGTACTACC AAGACGGCGG GGAGCCCTGG
GACTACCGGG TGATCGCCAT CCTGGACCCG CTGGGCGACC TGCTGCTGCT GGGCATGCTG
CTGCGGCTGA TCATCTCCCC GGGAGCGCGC AACGCGGCGT TGTGGCTGCT CGGCGCGGGC
TCGCTGTTCC AGACCGGCGC GGACGTCGTG GAGTCGGTGC TGCGCCTGAA CTCCTCCAAC
TGGTTCGGCT CGCACGTCGG CAACCTGTTG CTGGAGCTCG CCTGGCTGAT GTTCGCGGCC
TGCTGGGTCG CCGCGTCGCT GGTGCCCTCG GCGCACAGTC TGACCAGACC CGTGGCCGAG
ACCGCGCGCG ACGCCCTGCC GACCGCCTGG TCCCGGCCGC CCCGGATCTC CCCGCTGGTG
CTGGCCGCGC TGGTGACGCC GGCCATCAAC GCCGTCGAGC TGGCCCAGGG GAGCCTGGAC
ACCGGCTGGG CCGGGCCGGT GATCGGGCTC GGGGTGTACC TGATGATCCT GGCGCGGGTC
GCGGTGATGG TGCGCTCGCA CCGGCAAGCG CTGGCGCGGG AGTCGATCCT GCTGGCCGCC
AGCGAAGGGC TCGGGGTGGC CGCCGGGCGC GGGCAGGTGG CCGCGGCGCT GGCCGACGGA
GCCGCCGGGC TGTTCGCCGG ACGCTCGGCC GCGCACGCGG TGCTGGTCGC CGTGGACGGG
ACCGAGGGGG TGCGGGTGGC CGCCGCCGGA GCGGTGGACG GCGGCGCCGG GGACGTGCGG
GCCCACGCCC CGGCGGCACT GTCCGGTCCG GACTCCGCGT CCTGGCGCAA GATGCTGACC
AGGGTCTGCA CCTCGGCGAT CGTCCACGCC GCAGAGGACG ACGTGCCTTA CAGTCCCGCC
CTCTTCGACA CCGACGGCGA GCCGGAGGTG CGCCCCGCCG AGCCCGGGAG CGGGCCGAAG
CACCACCCGC ACTTCCACAC CGCCAACGTG GTGCACACCG CCGACCTGCC GCTGCCGCTG
GCCCGCCGGC TCGGACCGCC GGAACACGCC GGGGTCGTGC CGCTGGACGG CGCGACCGGC
ATGCTGGTCG TCGCCGCTGC CGAGGAGGAC CTGGCGGTCC TCGGCGGAGC GCTGGAGATC
CTGGGACGGC AGGCGTCCGC GGCGCTGGAG CGGATCGCGC TGAGCCAGGA GATCACGCGG
CGGGACAGCG AAGCGTACTT CCGTGCCCTG GTGCAGAACA CCTCGGACAC GATCCTGATC
GTCGACACCG GGCTGACCGT CCGCTACGCC TCGCCCTCCT CGACCGGGCT GTTCGGCGGC
CGGCCGCTGC GGGACCGGCC GCTGACCGAG GTGGTCGGCA AGGTCTACGC CGCCGAGGTC
GCGGTGCGCG CCGCCGACCC GACACCGCAG CCGCCGGTGC GCCGGGACTG GGAGATCTCG
GCCGACGGCG GGGAGCCGCA CGAGGTCGAG GCGACGATCG CCGACCTGCG CGCCGAGCCG
ACGGTCGGCG GCTTCGTGCT CTCGCTGCAC GACGTGACCA CCGCGCGCGG GCTGGAGCGC
ACGCTGCAGC GGCACGCCTA CCGCGATCCG CTGACCGACC TGCCGAACCG GCTGGCGTTC
ATCCGCGGGC TGGAGGACGC GGTGGAGCTG GCCTCCCCGA GCGTGTCGGT GACGGTGATG
CTGCTGGACC TGGACCGCTT CCGGGAGATC AACGACTTCC ACGGCCGCGA GGCGGGCGAC
GAGGTCCTGC GGGACATCGC CGAGCGGATC AGGTCCCGGC TCGGGCCCGG CGACGTGCTG
GCGCGCACCG GCGGCGACGA GTTCGCGGTG CTGGCCGTCC GGCGCAGCGA TGAGGCACCG
ATCCTGCCGA TCGGGATGCC CGGCGAGGAC AAGCCGTTCT ACGTCGGGCC GATCGCCGTC
ACCACCTCCG GCGCGGTCGC CACCTGCACC GTCGGCGCGA GTGGGGCGTC CCTGCTGGCG
GACGCGGAGA TGACGCTGCA CGCCGCCCGC GGCGCCGGAC CCAACACCTG GCGCGCCTAC
GACCCGCGGC TGCGCGCCGA CCTGGCCCGC AGCGCCGCCC GCCGCTCCGG CCTGGACCGC
GCGCTGGCCG AGGGCTCCTT CGAGCTCTAC TACCAGCCGA TCGTCTGGCT CGACGACGGC
GACATCGGCG GCTTCGAGGC CCTGGTCCGC TGGCCGCAGC CGGACGGCAC GATCATCCCG
CCCGACGAGT TCATCCCCCT GGCCGAGGCG ACCGGCCAGA TCCTCCCCCT CGGCCGCTGG
ATCCTGCGCA CCGCGACCGA CCAGGCCGCC CGCTGGAACG TCACCCGTCT GGCCCAGGGC
GTGGCTCCGG TGAAGATCTC CGTGAACGTC TCGGCACACC AGCTCCGCGA CCCCGGCTTC
CCCGACGAGG TCGGCAAGGC CCTGACCGAC GCCGGCCTGG ACCCGGCGTT CCTCATGGTG
GAGGCGACGG AGAGCTCGCT GATCGACCGC GCGGGCACGG CCCTGGCGAA CCTCAGGACA
CTGACACGCA GCGGCGTCGG CGTCTCCCTG GACGACTTCG GCACGGGATA CAGCTCGCTG
TCCTATCTCA GAGACCTGCC GGTCAACACC CTGAAGATCG ACAAGGCCTT CGTCGACGGC
GTCCCGGACG AGCCCCGCCA GACCGCGCTG GTGAAGGGCA TCATCGGCAT CGCGAAATCG
CTGACGCTGA TGGTCGTCGC CGAGGGTGTG GAGACCTCCC AGCAGCGGCG GGCCCTCGCG
CGCATGGGCG CCGACCTCGG ACAGGGGTAT CTGTACGCGC GCCCGATGCG GGTGGACGAG
GCCACGAAGC TGATGTGCGC GGGCCACGTG AAGCTGCCGC GCGGGATGGC GGGCCCGGAG
GACGACGGCG AGGACGACGC GGACTACACG GACTACTTGG AGGACGACTC GTGA
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| Protein sequence | MRSPSLLSGW PGRERRLLGI LAAVLVVILA VFFSSSDTLR TTAWFALSVW TTAAMVVGIR
ANRPPYPLAW YLLAISAGLL TASNHTDFAY ARHTLPNFAD WLGLLGYPLA LVGLRLIMKH
RLVGRDSSAT LDALIVVFAG AYAAWVYLVV PYYQDGGEPW DYRVIAILDP LGDLLLLGML
LRLIISPGAR NAALWLLGAG SLFQTGADVV ESVLRLNSSN WFGSHVGNLL LELAWLMFAA
CWVAASLVPS AHSLTRPVAE TARDALPTAW SRPPRISPLV LAALVTPAIN AVELAQGSLD
TGWAGPVIGL GVYLMILARV AVMVRSHRQA LARESILLAA SEGLGVAAGR GQVAAALADG
AAGLFAGRSA AHAVLVAVDG TEGVRVAAAG AVDGGAGDVR AHAPAALSGP DSASWRKMLT
RVCTSAIVHA AEDDVPYSPA LFDTDGEPEV RPAEPGSGPK HHPHFHTANV VHTADLPLPL
ARRLGPPEHA GVVPLDGATG MLVVAAAEED LAVLGGALEI LGRQASAALE RIALSQEITR
RDSEAYFRAL VQNTSDTILI VDTGLTVRYA SPSSTGLFGG RPLRDRPLTE VVGKVYAAEV
AVRAADPTPQ PPVRRDWEIS ADGGEPHEVE ATIADLRAEP TVGGFVLSLH DVTTARGLER
TLQRHAYRDP LTDLPNRLAF IRGLEDAVEL ASPSVSVTVM LLDLDRFREI NDFHGREAGD
EVLRDIAERI RSRLGPGDVL ARTGGDEFAV LAVRRSDEAP ILPIGMPGED KPFYVGPIAV
TTSGAVATCT VGASGASLLA DAEMTLHAAR GAGPNTWRAY DPRLRADLAR SAARRSGLDR
ALAEGSFELY YQPIVWLDDG DIGGFEALVR WPQPDGTIIP PDEFIPLAEA TGQILPLGRW
ILRTATDQAA RWNVTRLAQG VAPVKISVNV SAHQLRDPGF PDEVGKALTD AGLDPAFLMV
EATESSLIDR AGTALANLRT LTRSGVGVSL DDFGTGYSSL SYLRDLPVNT LKIDKAFVDG
VPDEPRQTAL VKGIIGIAKS LTLMVVAEGV ETSQQRRALA RMGADLGQGY LYARPMRVDE
ATKLMCAGHV KLPRGMAGPE DDGEDDADYT DYLEDDS
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