Gene Caci_6179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6179 
Symbol 
ID8337542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7112410 
End bp7113213 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID644959280 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003116874 
Protein GI256395310 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3231] Aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.169695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGC TCAGCTTTAA CAACATCCCG CCAGCCGACC ATCCGATTCC CGACGCCGTC 
CGCGACGCTG CGGGCGGCCG CACCATCGTT CCGGTCTGGT TCAACGAGGG CGGTTCGACC
TTTCGCCTCG GCGACGCTCC GGACGCTCGC TATGCGAAGT GGGCGCCGGC CGGCAGCTAC
CTCGACCTGG CGGGCGAGGC AGCACGGATT CGTTGGGCGG GGGCGTTCGT GACTGTGCCG
CAGGTGGTGG AGCAGGCGGC GAGTGCCGAG GGGTCGTTGC TCGTCACCGC CGCGCTCGAG
GGGGAGATGG CGGTGACTGA GCGGTGGAAG CAGGATCCTG CGACGGCTGT GCGAGTCATC
GGGGAGAGTC TGCGCGCTTT TCATGACGCG CTGCCGGTCG ACTCGTGCCC CTTCAGCTTC
TCCGCCGAGC TGCGGGTTGC CGAGGCTGTG CGCTATGCCG AGGAGCTGAA GGACCGCACC
ATGCATCCTG ACTTCGCCGG TCTCACGCGG GAGCAGGCGC TCAAGCGAGT CGCCGACATC
CCGCCGGTGG ACAAGCTCGT GGTCTGCCAT GGCGACACCT GCGCTCCAAA CACGCTGCTG
TCCGCCGACG GCCGCTTCGC AGGGCACGTA GACCTCGGCG ATCTCGGCGT CGCGGACCGC
TGGTCGGATC TGGCGATCGC CACCTGGTCG ACGACCTGGA ACTACGGCGA CGGCTGGCAG
GAGGCGCTGC TGGAGGCGTA CGGAATCGCG CCCGATCCCG AGCGCACCGA GTACTACCGG
CTGCTGTGGG AAGTCAGCTA CTGA
 
Protein sequence
MTSLSFNNIP PADHPIPDAV RDAAGGRTIV PVWFNEGGST FRLGDAPDAR YAKWAPAGSY 
LDLAGEAARI RWAGAFVTVP QVVEQAASAE GSLLVTAALE GEMAVTERWK QDPATAVRVI
GESLRAFHDA LPVDSCPFSF SAELRVAEAV RYAEELKDRT MHPDFAGLTR EQALKRVADI
PPVDKLVVCH GDTCAPNTLL SADGRFAGHV DLGDLGVADR WSDLAIATWS TTWNYGDGWQ
EALLEAYGIA PDPERTEYYR LLWEVSY