| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6175 |
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| Symbol | |
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| ID | 8337538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7104854 |
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| End bp | 7107424 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959276 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003116870 |
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| Protein GI | 256395306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCT CGCAGCGCAC CGTTCTGGTC GTCGGTCACG GCATGGTCGC CCACCGCTTC
GTCTCCAGCC TGCTGGAGCA CGGGCACCCG GCGCCCTCCG TCACCGTCTT CGGAGCCGAG
GACCGGCCCG CCTACGACCG CGTCCGCCTC TCCTCGTGGT TCGACGACCG CGATCACAGG
TCCTTGCACC TGGATCCGTA TCCGGACGGC GCGGTCGAGG TCGTCACCGG CGTCGCCGTG
GCGGCCATAG ACCGGGAGGC GCAGACCGTC ACCACCGCCG ACGGCAGCGT GCGCAGCTAC
GACACGCTGG TGCTGGCGAC CGGCTCGCGG CCGTTCGTGC CGCCGGTGGA GAACCACCAG
GCGCCGGGCT GCTTCGTCTA CCGCACTCTG GACGACGTCG AGGCCATCGC CGCGTACGCC
GCCGAGCACG GCCGCACGTC CGGCGTGGTG GTCGGCGGCG GACTGCTCGG GCTGGAGGCC
GCCAAGGCGC TGACCAGTCT GGGGCTGAAG ACCACGGTCG TGGAGTTCGC GCCGCGCCTG
ATGCCGCTCC AAGTGGACGA CGGCGGCGCG GCGGCGTTGC AAGGACGTAT CTCAGAACTC
GGAGTCACGC TGCACACCGG CACGCGCCTG GACAAGGTCC TGGTCGACGA AAACGGTGTC
GCGACGGCCG TTCAGGCCAT CTGCGGCGAG ACCACCGAGA CCATCGACGC CGACCTGGTC
GTCTTCGCCG CCGGCGTCCG CCCCGAGGAC AGTCTGGCGC GCAGTTCGGG TCTGGACGTC
GGCGAGCGCG GCGGCATCGT CGTGGACCGG CTCTGCCGCA CCTCCGACGA GCGCGTCTAC
GCGATCGGCG AGTGCGCCCT GGCCGCCGAC GGCCGCGTCT ACGGCCTGGT CGCGCCGGGG
TATCAGATGG CTGAGGCAGC CGCCGCGCAC ATCGCCAAGG AGGTCGAGGA CCGCGCCTTC
ACCGGCGCCG ACACCTCCAC CAAGCTCAAG CTGCTCGGCG TGGAGGTCGC CAGCTTCGGC
GACGCGTTCG GTACCGAGGA CGGCGCGATG TCCGCCACCT ACAGCGATTC GCGCCGACAG
GTCTACCGCA AGCTCACCAT CGCCCAGGAC GGCCGGCTTC TCGGCGGCAT CCTGGTCGGC
GACGCCGGGG ACTACGGCAC GCTGCGCGCC CTCGTCGGCG AGCAGCCGCC GGCCGCCCCC
GAAGCGCTGC TGCTGCCGGC CGGGACCGCC GGATCCGCCG CGATCGGACC GTCCGCGCTG
CCGGACGCCG CCGTGCTGTG TTCCTGCCAC AACGTCACCA AGGGTGCGAT CTGCACCGCC
ATCCACGACC TCGCCGAGCA GGGCGACGGC GAGGTGACGA CCAAGCAGGT CGGCGTGTGC
ACCAAGGCCG GGACCGGATG CGGGTCCTGC GTCAGCTCCA TCAAGACCCT GATCAAGGTC
GAGGGCGCGG GCGGTAGCTC GGGGCTCTGC GAGCACTTCA CGCAGACCCG CTCGGAGATC
TACACCATCG TCCGCCGCGA CCGCATCTCC ACCTACGCCG AACTCCTGGC CAAGCACGGC
ACCGCCGCCA AGGAGGTGAC CGACGGCTGC GACGTCTGCA AGCCCGCCGT CGGCTCGATC
CTGGCCTCCC TCGGCGGCCT GCTCGCCGAG GGCGAGAGCA AGCCGCACGT CCTGGACGGC
GGGCAGGCCG CGCTCCAGGA CACCAACGAC CACGTCTTGG CGAACCTGCA GCGCAACGGC
TCCTACTCGG TCGTGCCGCG CATCCCGGGC GGCGAGATCA CGCCGGACAA GCTCATCGTC
ATCGGCGAGG TGGCGCGCGA CTTCGGCCTC TACACGAAGA TCACCGGCGG CCAGCGCATC
GACCTGTTCG GCGCGACGAT GGCCGACTTG CCGAAGATCT GGCAGCGCCT GGTCGACGCC
GGCTTCGAAT CAGGGCACGC ATACGGCAAG GCGCTGCGGA CCGTGAAGTC GTGCGTGGGC
TCCACCTGGT GCCGCTACGG CGTGCAGGAC TCGGTGAAGA TGGCCATCGA CCTGGAGCTG
CGCTACCGCG GTCTGCGGGC GCCGCACAAG ATCAAGATGG CGGTGTCCGG CTGCGCGCGG
GAGTGCGCCG AGGCGCAGTC CAAGGACGTC GGCGTCATCG CCACCGAGCG CGGCTGGAAC
CTGTACGTCG GCGGCAACGG CGGCGCCCGG CCGCGGCACG CCGACCTGCT CGCCACCGAC
CTCGACGACG AGACGCTGAT CCGCACCATC GACCGCTTCC TGGCGCTGTA CATCGCCGAG
GCCGACCGGC TGGAGCGGAC CGCGACGTGG GTCGAGCGCT ACGAAGGCGG CCTGGAGCGG
CTTCGCAGCG TCCTGATGGA CGACGTGGAG GACCGCGGCG TGGAGCTGGA GGCGCTGATC
GCCGCGCACG TCGAGGCCTA CACCGACGAA TGGCGCGCGG TGCTGGACGA CCCGGTGAAG
CTGGCCCGCT TCGCCACGTT CGTCAACGCG CCGGAGGCGC CGGACCCGAC CGTCGCGTTC
GAACCCGAAC GCGGCCAGAT CAAGCCGTTG CTCACTCTTG GGAGGCGCTG A
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| Protein sequence | MSPSQRTVLV VGHGMVAHRF VSSLLEHGHP APSVTVFGAE DRPAYDRVRL SSWFDDRDHR
SLHLDPYPDG AVEVVTGVAV AAIDREAQTV TTADGSVRSY DTLVLATGSR PFVPPVENHQ
APGCFVYRTL DDVEAIAAYA AEHGRTSGVV VGGGLLGLEA AKALTSLGLK TTVVEFAPRL
MPLQVDDGGA AALQGRISEL GVTLHTGTRL DKVLVDENGV ATAVQAICGE TTETIDADLV
VFAAGVRPED SLARSSGLDV GERGGIVVDR LCRTSDERVY AIGECALAAD GRVYGLVAPG
YQMAEAAAAH IAKEVEDRAF TGADTSTKLK LLGVEVASFG DAFGTEDGAM SATYSDSRRQ
VYRKLTIAQD GRLLGGILVG DAGDYGTLRA LVGEQPPAAP EALLLPAGTA GSAAIGPSAL
PDAAVLCSCH NVTKGAICTA IHDLAEQGDG EVTTKQVGVC TKAGTGCGSC VSSIKTLIKV
EGAGGSSGLC EHFTQTRSEI YTIVRRDRIS TYAELLAKHG TAAKEVTDGC DVCKPAVGSI
LASLGGLLAE GESKPHVLDG GQAALQDTND HVLANLQRNG SYSVVPRIPG GEITPDKLIV
IGEVARDFGL YTKITGGQRI DLFGATMADL PKIWQRLVDA GFESGHAYGK ALRTVKSCVG
STWCRYGVQD SVKMAIDLEL RYRGLRAPHK IKMAVSGCAR ECAEAQSKDV GVIATERGWN
LYVGGNGGAR PRHADLLATD LDDETLIRTI DRFLALYIAE ADRLERTATW VERYEGGLER
LRSVLMDDVE DRGVELEALI AAHVEAYTDE WRAVLDDPVK LARFATFVNA PEAPDPTVAF
EPERGQIKPL LTLGRR
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