Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6173 |
Symbol | |
ID | 8337536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7103082 |
End bp | 7104398 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959274 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003116868 |
Protein GI | 256395304 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTAA TCACTACCGA ACAGACCCTG TCGGACAAGG CTCTGCTGGA CGCCTGGAAC CCTGAGGACG AGGAGCTCTG GGCAGTCGGC GCCCGCCGCA TCGCCCGCCG CAACCTCGCG CTGTCGATCC TGTCCGAGCA CATCGGCTTC TCGGTGTGGT CGCTGTGGTC GGTGCTGGTG CTGTTCCTCG GCCCGGGCTA TCACGTCGAC GCCGCCGGGA AGTTCCTGCT CACCTCGGTG CCCACGCTGG TGGGCTCGGT GCTGCGGCTG CCGTACAGCT TCGCCGTCAC CCGCTTCGGG GGACGGAACT GGACGGTCTT CAGTGCCCTG ATTCTCCTGA TCCCCTGTGC CCTGGCGGCC TTCCTGGTCA AACCGGGGGT GTCGTACTCG ACGCTGCTGG TGCTGGCGGC GATCACCGGC ATCGGCGGCG GGAACTTCGC CTCCTCGATG ACGAACATCA ACGCCTTCTA CCCCGACCGG CTCAAGGGCT GGGCGCTGGG GCTCAACGCC GGCGGCGGGA ACGTCGGGGT CGCCGCCGTG CAGCTGGTCG GGCTGGCGGT GCTGGCCTGG AGCGGCAAGG GGCATCCGGG ACTGGTCGCC GGGATCTACC TGCCGCTGAT CGTGGTGGCC GCGGCGGGAT CGGCGCTGTA CATGGACAAC CTGCCGAACC GGCGTGCGGA GAAGGGCGCG ATCCGCCAGG TGGCCAAGCG CGGCACGACG TGGGCCGTGT CAGTGCTCTA CATCGGGACC TTCGGGTCGT TCATCGGCTT CGGCTTCGCC TTCGGGCAGG TGTTGCAGGT GCAGTTCAAG AGCGAGTTCG CCACTCCCGT GGACGCCGCG TACCTGACCT TCCTCGGTCC GCTGCTCGGT TCGCTGTCGC GGCCGATCGG GGGACGGCTG GCCGACCGGC TCGGCGGGGC GCGGGTCACG CTGGTCACGT TCGCCTTGAT GGCGGCGGGC GCGGGTGTCG TGCTGGCCGC GTCCCACGCC GGTTCGCTGC CGGCGTTCGT GACCGGGTTC GTGCTGCTGT TCGTGTTCAG CGGGATCGGC AACGGCTCGG TGTACAAGAT GATCCCGGCG CTGTTCGCCG GGGAGGCCGA CGCCGACGCC CGGCGGCTGA GCGGGGCGCT GATCGGGCTG GCCGGAGCCG TTGGGGCATT CGGGGGAGTG CTGGTCAACA TGGCCTTCCG GCAGTCGTTC CTCAGTACGA AGAACGGGAA CGCGGCGTAC TGGACGTTCC TGCTGTTCTA CGCGCTGTGT GCGGCGCTGA CGTGGGCGGT GTTCATGCGT CGGGGGGCGG GTCGGACTCG CGGATGA
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Protein sequence | MSVITTEQTL SDKALLDAWN PEDEELWAVG ARRIARRNLA LSILSEHIGF SVWSLWSVLV LFLGPGYHVD AAGKFLLTSV PTLVGSVLRL PYSFAVTRFG GRNWTVFSAL ILLIPCALAA FLVKPGVSYS TLLVLAAITG IGGGNFASSM TNINAFYPDR LKGWALGLNA GGGNVGVAAV QLVGLAVLAW SGKGHPGLVA GIYLPLIVVA AAGSALYMDN LPNRRAEKGA IRQVAKRGTT WAVSVLYIGT FGSFIGFGFA FGQVLQVQFK SEFATPVDAA YLTFLGPLLG SLSRPIGGRL ADRLGGARVT LVTFALMAAG AGVVLAASHA GSLPAFVTGF VLLFVFSGIG NGSVYKMIPA LFAGEADADA RRLSGALIGL AGAVGAFGGV LVNMAFRQSF LSTKNGNAAY WTFLLFYALC AALTWAVFMR RGAGRTRG
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