| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6170 |
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| Symbol | |
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| ID | 8337533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7100338 |
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| End bp | 7101342 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959271 |
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| Product | Transketolase central region |
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| Protein accession | YP_003116865 |
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| Protein GI | 256395301 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0762568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CGCTGGACGG TGCGGCTCAG AGCACTGAGA TCTCCCTGGC GCAGGCCGTG
AACCGGGCGC TGCGCGATGC GATGACGGCC GATGAGAAGG TGGTCGTCTT CGGCGAGGAC
GTCGGCGTGC TCGGCGGCGT CTTCCGCGTC ACCGACGGCC TGACCCGCGA CTTCGGCGAG
CAGCGCTGCT TCGACACACC GCTGGCCGAG GCGGGCATCA TGGGCACCGC GATCGGCATG
GCGATGTACG GCTTCCGGCC GGTGGTGGAG ATGCAGTTCG ACGCGTTCTC CTACCCGGCG
TTCGAGCAGA TCGCCTCGCA CCTGGCCAAG ATGCGCAACC GGACGCGCGG CGCCCTGCCG
CTGCCGGTGG TCGTGCGCGT GCCCTACGGC GGCGGCATCG GCGGCGTGGA GCACCACTCG
GACTCCTCCG AGGGCTACTT CGCCGCCACG CCGGGCCTGC ACGTGGTGAC CCCGGCGACG
GTGTCGGACG CCTACACGCT GCTGCGCGCG GCGATCGAGT CCGACGACCC GGTGATCTTC
ATGGAGCCCA AGCGGCTCTA CTGGTCCAAG GACCAGCTGT CCACCACCGG TCCGGCGATC
GGCGAGGCGG CGGTACGGCG TCAGGGTGCT GATGCGACCC TGATCGCCTA CGGCCCGACG
GTGCAGACCG CCCTGGAGGC GGCCGAGGCC GGCGCCGCCG AGGGATACGA CCTGGAGGTC
GTGGACCTGC GCTCGATCGT GCCCTTCGAC GACGCGACGG TGACCGCCTC GGTCCGCAAG
ACCGGCCGCG CGGTGGTGAT CCACGAGGCC GCCGGCTTCG GCGGCACCGG CGCCGAGATC
GCGGCCCGGG TCTCCGAGCG CTGCTTCCAC TGGCTGGAGG CGCCGGTCCG CCGCGTGACC
GGATTCGACA TCCCCTACCC GCCGCCGAAG CTCGAACGGC ACCACCTGCC CTCGGTGGAC
CGCGTCCTGG ACGCGGTGGC CTCGCTGCAG TGGGAGGACC GGTGA
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| Protein sequence | MTATLDGAAQ STEISLAQAV NRALRDAMTA DEKVVVFGED VGVLGGVFRV TDGLTRDFGE
QRCFDTPLAE AGIMGTAIGM AMYGFRPVVE MQFDAFSYPA FEQIASHLAK MRNRTRGALP
LPVVVRVPYG GGIGGVEHHS DSSEGYFAAT PGLHVVTPAT VSDAYTLLRA AIESDDPVIF
MEPKRLYWSK DQLSTTGPAI GEAAVRRQGA DATLIAYGPT VQTALEAAEA GAAEGYDLEV
VDLRSIVPFD DATVTASVRK TGRAVVIHEA AGFGGTGAEI AARVSERCFH WLEAPVRRVT
GFDIPYPPPK LERHHLPSVD RVLDAVASLQ WEDR
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