| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6162 |
|---|
| Symbol | |
|---|
| ID | 8337525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7090664 |
|---|
| End bp | 7091422 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959263 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003116857 |
|---|
| Protein GI | 256395293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0634319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAGA TTCGGGTGTT GTCGCTCAAC ACGCTCTACA AGGACAAGCC CAGGGTTCGG
CTGCGCGCGC TGGCCGAGGT CTTGGCGGAC TCCGACTACG ACGTGGTCTG TCTTCAGGAG
CTCTCGCTGC CGCCGAGCTT CGGGCTGATC CGTTCGCTGA CGAAGACCTC GTTCCCGTAC
GCCGCCCACG GCACCAGGCT GCCGACGGTC GCCGGCGGGC TGCTGACGCT CTCGCGCGTC
CCGCTGGTCG GGCACCGCTA CCACGTTGTC GCCGCGCCGG CGAAGTGGCG GGCGGACGTG
GTGATGCGCC GGGGCGTGCT GGTGGCCCGC TTCGCCGTCG ACGGGGAGTT CTTCACCGTC
ACCAACACGC ACCTGTCGCC GAACCACGAG ACCGACTGGT CGCAGGCCGC GCCGTTCACC
CGCGTCCAGC AGGCGGAGCT GGCGCGGATG GCGCAGGCGA TCCGCCGCAT CGACTCCGGC
GAGCCGGTCA TCGCCGTCGG GGACTTCAAC GTCCCGCGCG ACTCCTGGCT CTTCGAGGGC
TTCCAGGCCG CCTCCGGGCT GCGGGACGCC TTCGACGGCG ACGCCGCCAC GACCTTCCGC
CCGGTCCCCG GCTGGGACGG CGCCGCGCTG GACCAGATCC TGGTCTCGCC GGGCGTGCCC
GCGAAAGCCG AAGTGGTGAT GCAGGAGAAG GTGCGGATGG GCGACGGGCA GGACCGGTAC
CTGTCGGACC ACTACGGCGT GGCTGCCACG ATCGGGTGA
|
|---|
| Protein sequence | MPKIRVLSLN TLYKDKPRVR LRALAEVLAD SDYDVVCLQE LSLPPSFGLI RSLTKTSFPY
AAHGTRLPTV AGGLLTLSRV PLVGHRYHVV AAPAKWRADV VMRRGVLVAR FAVDGEFFTV
TNTHLSPNHE TDWSQAAPFT RVQQAELARM AQAIRRIDSG EPVIAVGDFN VPRDSWLFEG
FQAASGLRDA FDGDAATTFR PVPGWDGAAL DQILVSPGVP AKAEVVMQEK VRMGDGQDRY
LSDHYGVAAT IG
|
|---|
| |