Gene Caci_6158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6158 
Symbol 
ID8337521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp7088001 
End bp7088729 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content73% 
IMG OID644959259 
Productprotein of unknown function DUF1707 
Protein accessionYP_003116853 
Protein GI256395289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCG GCTACACTGA CCGCATGACT TCCGCGCCCG AAGAGAGCCG GTTCGTGCCG 
GTCATCGTGC CCGATGCCGC AGAGGTTTCG GAGGTTCCGG AGGCTCCGGC TGTCGCCCCG 
GGCGGCGGCG TCCAGGTCCG CGCCTCCGAC GCCGAGCGCG ACGAGGTGGC GGCGGTCCTC 
GCCGAAGCGC TGGCCCAGGG CCGGCTGACC AGCGCCGAAC TGGCCGAGCG CATCGATGCG 
GCGTACTCCG CCACGACCCG CGCCGAGCTG GTCCCGCTCA CCGCCGACCT GCCCGACGAC 
ATGCGCAAAG CACCGGCCAC CGGCCCGCTC GCGGCGGTGG AACGCCAGGA GCTGAGCGCG 
ACCTTCAGCA AGGTGATCCG CTCCGGCCGC TGGGTCGCCG GGCGGCACAC CGTGGCCACC 
GCGCGCTTCG GGGCGCTGAT CGTGAACCTG GCCGACGCCG TGCTGCCGGG CCGCGAGATC 
ACCCTGGACG TCAACGCCTT CTGCGGCAAG GCGATCATCA CGGTCCCGGA GAACGCGCGC 
GTGGTCGACG AGGGCGGCGC GCTGTTCGGC AAGCGCTCGG TCACCGGCAG CGCGCCGGAG 
GGCGCCGAGG ACGGACCGCT GATCCGGATC ACCGGCAAGT CCACGTTCGG CAAGATCGTC 
GTGCACCGCG GCGGACGCGG CAGCGACAAC CCCTACGTGT GGTGGCGGGA GAACCGGCAC 
CAGCGCTGA
 
Protein sequence
MVSGYTDRMT SAPEESRFVP VIVPDAAEVS EVPEAPAVAP GGGVQVRASD AERDEVAAVL 
AEALAQGRLT SAELAERIDA AYSATTRAEL VPLTADLPDD MRKAPATGPL AAVERQELSA 
TFSKVIRSGR WVAGRHTVAT ARFGALIVNL ADAVLPGREI TLDVNAFCGK AIITVPENAR 
VVDEGGALFG KRSVTGSAPE GAEDGPLIRI TGKSTFGKIV VHRGGRGSDN PYVWWRENRH 
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